Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1625 ATGATTTCAGGTCGGTGTGCAGCTTGCAAGAATCAGAGAAGAAAGTGCCCTTCGGATTGCATTTTCTCTCCCTATTTTCCCGCCAATGATCCTAAAAGATTTTCTTGCGTTCATAGAATATATGGTGGCAGCAATGTTGGAAAAATGCTTCAGCAAATCCCGTCCTATGTCAGAGCAGAAGCAGCAGATTCATTATATTTTGAAGCACAATGTAGGATTGAAGACCCTGTTTATGGTTGTGTTAGGATCATTTCTCAGTTGCATCAAGAAATCCACAATGCAGAAAGTGAGCTAGCCAGACTCCAAGCTCTTATTGCCTTCCATAAGTCACAAACCCCACAAGTTAAAGCTGAATCAAACTTGGATGTCTTGCCATCACAAAGCAGCTTAGGGCAGTTTCAGTTCAATCCTTCAACTGAAATTCCTTATTGGTTCAATTAA 441 0.4082 MISGRCAACKNQRRKCPSDCIFSPYFPANDPKRFSCVHRIYGGSNVGKMLQQIPSYVRAEAADSLYFEAQCRIEDPVYGCVRIISQLHQEIHNAESELARLQALIAFHKSQTPQVKAESNLDVLPSQSSLGQFQFNPSTEIPYWFN 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1625 146 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Glsi01g1625 146 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 119 - -
Glsi01g1625 146 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Glsi01g1625 146 Coils Coil 84 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1625 Glsi-ChrGlsi01 77328713 77329666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1625 1 116 AS2 family AT3G26660 58.621 1.03e-48 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi01g1625 LOB 1.1e-36 No_clan