Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1620 ATGGAAGCCTTGAAAAGCCAGTTTTATCCCACCCCTTTGGGGAATAGGAACGTCCAAGAAATAGGACAAGCAGCAGTAACAGAAGCCACAAAGGCCAGGGCATTAATGGAGGTGGCTGCAGGAGCATCGAAATACCAGTCAGGCCTGGCTCTGGAGAGCTACTTAGACTCCGGTCACCAAGGTGCAGTGCCCCCCATGGCACCTTCTAGGGTGGCTGGAGGGTTAACTCAATCATCATCGAGTTCGGGAATTTTCTTTCAAGGAGATGGGCAGTCACAGAATCTTCTTAACTCTCACTTAAGTTCATCTTTTGGTAACTCATCCAACTCGATTACTGGAACTGGGCGTTCAAATCTGGGTCCAGTTTCTGGAGACATGAATAATACAGTTCTAAACAGTGTAGCAAATTCAGGGCCAAGTGTTGGAGCAAGTTCTTTAGTCACAGATGCAAACTCTGCACTTTCAGGAGGCCCCCATTTGCAGAGAAGTGCAAGCATTAACACAGACTCATACTTACGTTTACCTGCATCACCCATGTCCTTCTCATCCAATAATATTAGCATTTCAGGATCATCAGTTATGGATGGTTCTTCTGTAGTACAGCAGAGCTGTCATCAAGACCAGAATGTTCAACAAATGCAGCAGCATCAGCAGCAGCCACAGGGTGCTTCTAATGCAACATCTTTGCCTGCACCTCAAACTGGCTCAGCTCCTCTGCCAATAGGTGCACGAGTGCCTGGATCTTTCATTCAAGATCCAAATAATCTATCCCAGCTGCAGAAGAAACCTCGGCTGGATATTAAGCAGGAAGATATGATGCAACAGCAGGTAATGCAGCAGTTTCTTCAGAGACAGGACCCCATGCAGTTCCAGGGTCGTAATCCACAACTACAGGCTTTGCTTCAGCAGCAGAGGTTGAGGCAACAGCAACAGCAGCAACAAATCCTTCAATCAATGCCACAGCTACAGAGAGCTCACTTGCAACAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAGCAACAACAACAACAAATGCATTTGAGGCAGCAATTACAGCAACAAGTAATGCAACCCGTATCTGGCAAGCGCCCATATGATAGTGGTGTATGTACCCGTCGTTTGATGCAATATCTATATCATCAAAGGCAGCGACCGAATGATAATAGTATTGCCTACTGGAGAAAATTTGTTGCTGAATATTATTCTCCTCGTGCAAAGAAACGGTGGTGTTTGTCATTGTATGATAACGTTGGACAACATGCACTTGGTGTCTTCCCTCAAGCATCTATGGATGCATGGCAGTGCGACATATGTGGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTTTGAAGTACTCCCTAGACTTAACGAAATCAAATTTGGCAGTGGAGTGATCGATGAACTTCTTTTTCTGGACTTGCCACGTGAATTTAGATTTCCGTCTGGTGTAATGATGTTAGAATATGGAAAAGCAGTTCAAGAAAGTGTATATGAGCAGCTTCGTGTTGTTCGTGAGGGTCACCTTCGCATCATATTCACACAAGATCTGAAGATATTATCTTGGGAATTTTGTGCAAGGCACCATGAAGAACTTCTTCTTCGAAGATTGGTTGCACCGCAGGTCAACCAATTGCTTCAGGTAGCTCAGAAATGCCAGAGTACATTTACTGAAAATGGATCTGATGGGCTTTCTCAGCAGGACTTGCAGACAAACAGCAATATGGTATTATCAGTTGGGCGTCAGCTGGCAAAGAGTTTGGAGTTACAGGCTTTAAATGACTTAGGTTTCTCCAAAAGATATGTGAGATGTTTGCAGATATCTGAGGTTGTGAATAGCATGAAAGATCTGATGGACTTTTGCCGAGAGCACAAAGCTGGGCCAACTGAGGGCTTGAAAAATTATCCTCGACATGCAACTGCGGCCAAGCTCCAGATGCAAAAGATGCAGGAGATGGAACAGCTAGCAAGTATTCAAGGTCTGCCAACTGACCGAAACACACTTAATAAGCTGATGGCGTTGCATCCTGGATCGAACAGCCAAATCAACAACAGTCATAATCTAGTTAGTCGTGGTGCTTTGAGTGGGTCCGCACAAGCTGCTTTGGCACTGTCTAACTACCAGAATCTTCTCAATAGGCAAAACTCAATGATTTCTAACCCTAGCTCACTTCAACGAGAAGTGTCATCTTCCTTCAATAATTCAAACCAGAGTCCATCTTCAACCTTTCAAGGTGCTGCTGCTTTGATTCCAGGCTCCATGCAGAATTTACCAGTTAGTGGTTTCTCAAGTCCCCGTCTATCCCCACAGCAGCAGCAACAGCAGCAGCAGTTGCAACAATTTAAACAGCACTATTTAAGTGCAAATGGTTTACACCAACAAAGTCATTCACAGGGCTCTCAGGGAAATCAGGCTCTGGAACAGCAGATGCTCCAGCAACTGCTGCAGGAATTGTCTAATAATAGCGGGGGAGGAGTGCAACCTCAGTCTCTTTCTGGACCCAATTCGAATGGAAGTATTGCAAAGAATGGGTTGGGTTTTGGAGGTAACCCTCCGCCAGTAACTGGAGTTACTTCTAATTCCAATGTTTCAGGCAGTAATGGACCTGCTCCTAGCAGGAGCAACAGCTTCAAAGCTGCTTCAAACAGTGATTCTTCTGCAGCTGGTGGCAACAATGGATTCAACCAGAGAACATCTGGTATGCCTCAAAATCTCCATTTGCAAGATGTGGTTCAGGATATTGCCCGTGAGTTCCCGGATAGTAGTTTCTTTAACAGTGAACTTGATGATAACATGGGTTATGCATGGAAGGCATGA 2823 0.4524 MEALKSQFYPTPLGNRNVQEIGQAAVTEATKARALMEVAAGASKYQSGLALESYLDSGHQGAVPPMAPSRVAGGLTQSSSSSGIFFQGDGQSQNLLNSHLSSSFGNSSNSITGTGRSNLGPVSGDMNNTVLNSVANSGPSVGASSLVTDANSALSGGPHLQRSASINTDSYLRLPASPMSFSSNNISISGSSVMDGSSVVQQSCHQDQNVQQMQQHQQQPQGASNATSLPAPQTGSAPLPIGARVPGSFIQDPNNLSQLQKKPRLDIKQEDMMQQQVMQQFLQRQDPMQFQGRNPQLQALLQQQRLRQQQQQQQILQSMPQLQRAHLQQQQQQQQQQQQQQQQQQQMHLRQQLQQQVMQPVSGKRPYDSGVCTRRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVGQHALGVFPQASMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPREFRFPSGVMMLEYGKAVQESVYEQLRVVREGHLRIIFTQDLKILSWEFCARHHEELLLRRLVAPQVNQLLQVAQKCQSTFTENGSDGLSQQDLQTNSNMVLSVGRQLAKSLELQALNDLGFSKRYVRCLQISEVVNSMKDLMDFCREHKAGPTEGLKNYPRHATAAKLQMQKMQEMEQLASIQGLPTDRNTLNKLMALHPGSNSQINNSHNLVSRGALSGSAQAALALSNYQNLLNRQNSMISNPSSLQREVSSSFNNSNQSPSSTFQGAAALIPGSMQNLPVSGFSSPRLSPQQQQQQQQLQQFKQHYLSANGLHQQSHSQGSQGNQALEQQMLQQLLQELSNNSGGGVQPQSLSGPNSNGSIAKNGLGFGGNPPPVTGVTSNSNVSGSNGPAPSRSNSFKAASNSDSSAAGGNNGFNQRTSGMPQNLHLQDVVQDIAREFPDSSFFNSELDDNMGYAWKA 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1620 940 MobiDBLite consensus disorder prediction 758 782 - -
Glsi01g1620 940 Coils Coil 322 347 - -
Glsi01g1620 940 MobiDBLite consensus disorder prediction 821 905 - -
Glsi01g1620 940 MobiDBLite consensus disorder prediction 855 905 - -
Glsi01g1620 940 MobiDBLite consensus disorder prediction 192 234 - -
Glsi01g1620 940 MobiDBLite consensus disorder prediction 723 751 - -
Glsi01g1620 940 MobiDBLite consensus disorder prediction 821 845 - -
Glsi01g1620 940 Pfam LIM-domain binding protein 375 635 IPR029005 -
Glsi01g1620 940 MobiDBLite consensus disorder prediction 723 782 - -
Glsi01g1620 940 PANTHER LIM DOMAIN-BINDING PROTEIN 106 923 IPR029005 -
Glsi01g1620 940 MobiDBLite consensus disorder prediction 192 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1620 Glsi-ChrGlsi01 77232810 77242183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1620 367 641 C2H2 Transcription Factor Family AT1G43850 58.182 6.58e-106 347