Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1608 ATGCTTACATGCGTACAACACGTAGAGACATTTCCGCCATCGAAGTTCAGACTAACTATAAATAAGCTTCATACACGAATAGTACTACTCACCAGGAGCAAATACATGAATCTAATGCCAACCTCTGAGGAGACCCACCTCTTCTTCTTCCTTATCCTTGTTTTGATACCTCTCTTCTTCTTCCTCAAGCACATCTTCTCCAAGAAACCCCCTCTTCCACCAGGTCCATTTCCATGGCCTATAATAGGAAATATCTTCCAAATGGGAGACGGAACTCAACCCCTTTACGCCATTTTTGATCGCCTAGCCAGAACCTATGGCCCCCTCCTGTCTCTCAGGCTCGGCACCCAAATTGCCATTATAGGCTCATCACCAGCTGCTGCTAGAGAAATTCTAAAAACCCACGATCGATTCTTGTCTGGTAGGTACGTCTCAGAAGTTACTCCTGTTTTCTATCCTTACACCATGGGCTTTTCCAGAGATTGCAGCGAGCAATGGAGCAATGCTCTGTTTTCTGTGGATTTTCTGGATTTTGAAGGGAAGGGGATTGGGGAAGAACTGAGAGATTTGATAAGCAGTGTGGGTGAGCTGGGTCTTGTTCCGAATTTATCAGATATATTTCCTGTTCTGAGTGGGTTGGATGTTCAGGGTCTGCATAAGAAGAAGATGAAGATTCTGGGGAAGTTAGTCTCTGTTTGGGAGAATATAATTGAAGAAAGAAGAAAACAAGGGATGCATTGTGACCCATTGCAAAGGGACTTCTTGGATACCTTGATTGAAACTGGATTCAACGATGGTCAGATCAACCAGTTGATTCTGAGTATCAGACTCCATCCTCCAGGACCACTTCTCCTTCCTCACAGGGCATTGGAGACTTGCCAAGTGATGGGTTTCAGTATCCCAAAAGACTCTATTATCTTTGTGAACATGTGGGCTATAGGGCGTGACCCTTCTATTTGGAAGGACCCTACGAGGTTTGAGCCTCAAAGGTTTGTGGAAAATGGGTTGGACTTTAAGGGAAAGGACTTTGAATATGTGCCATTTGGGGCGGGAAGGAGGCTTTGCCCTGGTCAGCCTTCTGCCGTTAGGAAAATTCCATTGGTTGTGGCCGCTTTGGTCCATTCTTTTCGTTGGTTCCTCCCTAACAATGAAGATGCCTCTGTATTGGACATGACAGAAAGGTTCATTATTACTTTGCGGAAAAAGATGCCTTTGAAGCTAATTCCTAAACTCAGAATCTGA 1242 0.4469 MLTCVQHVETFPPSKFRLTINKLHTRIVLLTRSKYMNLMPTSEETHLFFFLILVLIPLFFFLKHIFSKKPPLPPGPFPWPIIGNIFQMGDGTQPLYAIFDRLARTYGPLLSLRLGTQIAIIGSSPAAAREILKTHDRFLSGRYVSEVTPVFYPYTMGFSRDCSEQWSNALFSVDFLDFEGKGIGEELRDLISSVGELGLVPNLSDIFPVLSGLDVQGLHKKKMKILGKLVSVWENIIEERRKQGMHCDPLQRDFLDTLIETGFNDGQINQLILSIRLHPPGPLLLPHRALETCQVMGFSIPKDSIIFVNMWAIGRDPSIWKDPTRFEPQRFVENGLDFKGKDFEYVPFGAGRRLCPGQPSAVRKIPLVVAALVHSFRWFLPNNEDASVLDMTERFIITLRKKMPLKLIPKLRI 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1608 413 SUPERFAMILY Cytochrome P450 66 412 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1608 413 Gene3D Cytochrome P450 60 274 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1608 413 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 49 150 - -
Glsi01g1608 413 Pfam Cytochrome P450 275 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1608 413 Pfam Cytochrome P450 73 150 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1608 413 Gene3D Cytochrome P450 275 409 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1608 413 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 348 357 IPR017972 GO:0005506|GO:0016705
Glsi01g1608 413 PRINTS E-class P450 group I signature 127 148 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1608 413 PRINTS E-class P450 group I signature 309 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1608 413 PRINTS E-class P450 group I signature 103 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1608 413 PRINTS E-class P450 group I signature 345 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1608 413 PRINTS E-class P450 group I signature 355 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1608 Glsi-ChrGlsi01 77071966 77075428 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1608 50 409 Cytochrome P450 AT3G26180 31.105 6.33e-49 168