Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1607 ATGAATCTAATGACAATCTGTGAGGAGAACCACCTCTTCTTCTTTATCCTTTTTTTGATACCTCTCTTCTTCTTCCTCAGGCGCAACTTCTCCGAGAAACCCCCTCTTCCACCAGGTCCATTTCCATGGCCTATAATAGGAAATATCTTCCAAATGGGAGATGGAACACAACCCCATTACGCCATTTTTGCTCGCCTAGCCAGAACCTATGGCCCCCTCATGTCTCTCAGGTTCGGCACCCAAATTGCCATTATAGGCTCATCACCAGCTGCTGCTAGAGAAATTCTAAAAACCCACGATCGATTCTTGTCTGGTAGGTACGTCTCCGAAGTTACTCCTGTTTTCTATCCTTACACCATGGGTTTTTCCAGAGATTGCAGTGAGCAATGGAGGTACCTCAGAACTATCTGCAAAAGCGAGCTCTTTTCTGCAAAGGCAACAGAAGCCCAGATGGGTTTGAGGGAGAAGAAGGTGATGGAACTTGTGGATTTTTTGGGTTCGAAGGAGGGTGAGGTGGTGGATCTAGGAAGGGTAGTATATGCGACTGTGACGAATATGATAAGTAATGCTCTATTTTCTGTTGATTTTCTGGATTTTGAAGGGAAGGGGATTGGGGAAGAACTGAGAGATTTGATAAGCAGTGTGGGTGAACTGGGTCTTGTTCCGAATTTATCAGATATATTTCCTGTTCTGAGTGGGTTGGATGTTCAGGGTCTGCATAGGAAGAAGATGAAGATTCTGGGGAAGTTAGTCTCTGTTTGGGAGAATATAATTAAAGAAAGAAGAAAACAAGGGACGCATTGTGACCCATTGCAAAGGGACTTCTTGGATACCTTGATTGAAACTGGATTCAACGATGGTCAGATCAACCAGTTGATCCTGGAGTTACTTATAGCAGGCACAGACACAAGCAGCATGGCGATAGAATGGGCAATGGCAGATCTGGTGAAAACTCAAGAACCAATGAAGAAACTGAAGAACGAGGTAGACACCAAAATAGGCAAATATCAAAGGGTAAAAGACTCCCATTTGACCCATCTTCCATATCTCCAAGCTTGCATAAGAGAAAGTATCAGACTCCATCCTCCTGGGCCACTTCTCCTTCCTCACACGGCAGTGGAAACCTGCCAAGTGATGGGTTTTACTGTCCCAAAAGACTCTCTTATCTTTGTGAACATGTGGGCTATAGGTCGTGACTCTTCTATTTGGAAGGACCCTTTGAGGTTTGAGCCTCAAAGGTTTGTGGAAAATGGGTTGGACTTTAAGGGGAAAGACTTTGAGTATGTGCCATTTGGGGCGGGAAGGAGGATTTGCCCTGGTCAGCCTTCTGCTGTTAGGCAAATTCCCTTGGTTTTAGCCTCTTTGGTCCATTCTTTTCATTGGTTCCTCCCTAACAATGAGGATGCCTCTAAACTGGACATGACTGAAAGGTTCATTATTACTATGCGGAAAAAGGTGCCTTTGAAGCTTATTCCTAAACTCAGAATCTGA 1491 0.4447 MNLMTICEENHLFFFILFLIPLFFFLRRNFSEKPPLPPGPFPWPIIGNIFQMGDGTQPHYAIFARLARTYGPLMSLRFGTQIAIIGSSPAAAREILKTHDRFLSGRYVSEVTPVFYPYTMGFSRDCSEQWRYLRTICKSELFSAKATEAQMGLREKKVMELVDFLGSKEGEVVDLGRVVYATVTNMISNALFSVDFLDFEGKGIGEELRDLISSVGELGLVPNLSDIFPVLSGLDVQGLHRKKMKILGKLVSVWENIIKERRKQGTHCDPLQRDFLDTLIETGFNDGQINQLILELLIAGTDTSSMAIEWAMADLVKTQEPMKKLKNEVDTKIGKYQRVKDSHLTHLPYLQACIRESIRLHPPGPLLLPHTAVETCQVMGFTVPKDSLIFVNMWAIGRDSSIWKDPLRFEPQRFVENGLDFKGKDFEYVPFGAGRRICPGQPSAVRQIPLVLASLVHSFHWFLPNNEDASKLDMTERFIITMRKKVPLKLIPKLRI 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1607 496 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 13 493 - -
Glsi01g1607 496 FunFam Predicted protein 297 490 - -
Glsi01g1607 496 SUPERFAMILY Cytochrome P450 37 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1607 496 Gene3D Cytochrome P450 30 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1607 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Glsi01g1607 496 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1607 496 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1607 496 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1607 496 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1607 496 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1607 496 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1607 496 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1607 496 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1607 496 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1607 496 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1607 496 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1607 496 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1607 496 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1607 496 Pfam Cytochrome P450 37 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1607 Glsi-ChrGlsi01 77047542 77049458 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1607 12 492 Cytochrome P450 AT2G45550 42.970 2.34e-128 381