Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1606 ATGGGAGATGGAACCCAACCCCTTTACGCCATTCTTGCTCACCTAGCCAGAACTTACGGCCCCCTCATTGAGCAATGGAGGTGCCTTAGAACTATCTACAAAAGCGGGCTCTTTTCTGCAAAATTAACAGAAGCTCAGGGTGTTTTGAGGGAGAAGAAGGTGATGGAGCTGCTGGGTTTCTTGGATTCGAAGGAGGGTGAGGTGGTGGATCTAGGAAGGGCAGTATATGTGACTGTCACGAATATGATAAGCAATGCTCTGTTTTCTGTGGATTTTTTGGATTTTGAAAGGAAGGGGATTGGGGAAGAACTGAGAGATCTGATAAGCAGTGTGGATGAGTTGGGTCTTGTTAATTTGTCCGATATATTTTGTGTTGTGACTGGATTGGATGTTAAGGACCTGATACAGTATTTCGTTGATCCAAATCCAATACATTTTTCCTTCTGTAGGAGTTACTTATTGCAGGCACAGATGCATGACCCTTCTATTTGGAAGGACCCTATGAAGTTTGAGCCTCAAAGGTTTGTAGAAAATGAGTTGGACTTTAAGGGCAACAACTTCGAGTTCGTGCCTTTTGGGGCAGGAAGGAGGATTTGCCCTGGCCAGCCTTTTGCCGTGAGGCAAGTTCTAATGGTTGTGGCCTCTTTGGTCCATTATTTTAATTGGTTCCTCCCCAACAATGAGGATCCCTCCGAATTGGACATGACCGAAAGCTTCACCATTAATATGCGAAAAAAGGTGCCTTTGAAGTTTATTCCAAAACTCAGAGTCTGA 774 0.4444 MGDGTQPLYAILAHLARTYGPLIEQWRCLRTIYKSGLFSAKLTEAQGVLREKKVMELLGFLDSKEGEVVDLGRAVYVTVTNMISNALFSVDFLDFERKGIGEELRDLISSVDELGLVNLSDIFCVVTGLDVKDLIQYFVDPNPIHFSFCRSYLLQAQMHDPSIWKDPMKFEPQRFVENELDFKGNNFEFVPFGAGRRICPGQPFAVRQVLMVVASLVHYFNWFLPNNEDPSELDMTESFTINMRKKVPLKFIPKLRV 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1606 257 Gene3D Cytochrome P450 7 150 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1606 257 Pfam Cytochrome P450 154 241 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1606 257 SUPERFAMILY Cytochrome P450 9 254 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1606 257 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 20 134 - -
Glsi01g1606 257 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 192 201 IPR017972 GO:0005506|GO:0016705
Glsi01g1606 257 Gene3D Cytochrome P450 151 254 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1606 257 PRINTS E-class P450 group IV signature 183 199 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1606 257 PRINTS E-class P450 group IV signature 158 176 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1606 257 PRINTS E-class P450 group IV signature 199 217 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1606 Glsi-ChrGlsi01 77009920 77011486 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1606 160 249 Cytochrome P450 AT1G33730 48.889 3.01e-28 108