Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1605 ATGAATCTAATGCCAACCTCCGAGGAGAACCACCTCTTCTTCTTCCTTATCTTTTTATTGATACCTCTCTTCTTCTTACTCAAGCACGTCTTCTCCAAGAAACCCCCTCTTCCACCAGGTCCATTTCCATGGCCTATAATAGGAAACGTCTTCCAAATGGGAGATGGAACCCAACCCCTTTACGCCATTTTTGCTCACCTTACCAGAACCTATGGCCCCCTCATGTCTCTCAGGCTCGGCACCAAAATTGCCATTATAGCCTCATCACCAACTGCTGCTAGAGAAATCCTGAAAACCCATGATCGATTCTTGTCTGGCAGGTACGTGTCAGAAGTAACTCCCATTTTCTACCCTTTCACTATGGCTTTTTCCACAGATTGCAGTGAGCAATGGAGGTACCTCAGAACTATCTGCAAAAGCGGGCTCTTTTCTGCCAAAGTAACAGAAGCTCAGGGGGGTTTGAGAGAGAAGAAGGTGATGGAGCTGCTGGGTTTCTTGGGTTCCAAGGAGGGTGAGGTGGTGGATCTAGGAAGGGCAGTATATGTGACTGTCACGAATATGATAAGCAATGCTCTGTTTTCTGTGGATTTTCTGGATTTTGAAGGGAAGGGGATTGGGGAAGAACTGAGAGATCTGATAAGCAGTGTGGATGAGTTGGGTCTTATTAATTTGTCGGATATATTTTGTGTTGTGACTGGGTTGGATGTTAAGGGTCTGCAGAAGAAGAAGATGAAGATTCTGGAGAAGTCAGTCTCTGTTTGGGAGAATATAATTGAAGAAAGAAGAAAACAAGGGACGCATTGTGACCCATTGCAAAAGGATTTCTTGGATAACTTGATTGAAACTGGATTCAACGATGGCCAGATCAACCAGTTGATCCTGGAGTTACTTATTGCAGGCACAGACACAGGTAACATTGTAATAGAATGGACAATGGCAGAATTGGTGAAAACGGAAGAGGCAATGAGACAACTGAAGGACGAGCTAGACACCAAAATAGGCAAAGATCAAATGGTAAAAGACTCCCATTTAGCCCATCTTCCATATCTCCAAGCATGCGTCAAAGAGAGTATGAGACTCCATCCTCCGGGGCCACTTCTCCTTCCTCACATGGCAGTGGAGACTCGCCAAGTGATGGGTTTCACTGTCCCAAAAGACTCTCTCGTCTTTGTGAACATTTGGGCTATGGGGCATGACCCTTCTATTTGGAAGAACCCTTTGAATTTTGAGCCTCAAAGGTTTGTAGAAAATGAGTTGGACTTTATGGGCAACAACTTGGAGTTCGTGCCTTTTGGGGCAGGAAGGAGGATTTGCCCTGGTCAGCCTTTTGCCGTGAGGCAAGTTCTAATGGTTGTGGCCTCTTTGGTCCACCATTTTAATTGGTTCCTCCCTTACAATGAGGATCCCTCCGAATTGGACATGACCGAAAGCTTTACCATTAATATGCGAAAAAAGGGAGCAGCAACTACTTGTTGTGTGGCGTTGAATCAACAAGTGATGGGAATTAGCGGCGAGTATTTTTCAGATAGTAATTTGGCCAATCCAACTCCGAAGGCAAAGGACATGGAATTGGCAAAGAAACTCTGGGATTTCAGCATAAATATGACTAAATAG 1614 0.448 MNLMPTSEENHLFFFLIFLLIPLFFLLKHVFSKKPPLPPGPFPWPIIGNVFQMGDGTQPLYAIFAHLTRTYGPLMSLRLGTKIAIIASSPTAAREILKTHDRFLSGRYVSEVTPIFYPFTMAFSTDCSEQWRYLRTICKSGLFSAKVTEAQGGLREKKVMELLGFLGSKEGEVVDLGRAVYVTVTNMISNALFSVDFLDFEGKGIGEELRDLISSVDELGLINLSDIFCVVTGLDVKGLQKKKMKILEKSVSVWENIIEERRKQGTHCDPLQKDFLDNLIETGFNDGQINQLILELLIAGTDTGNIVIEWTMAELVKTEEAMRQLKDELDTKIGKDQMVKDSHLAHLPYLQACVKESMRLHPPGPLLLPHMAVETRQVMGFTVPKDSLVFVNIWAMGHDPSIWKNPLNFEPQRFVENELDFMGNNLEFVPFGAGRRICPGQPFAVRQVLMVVASLVHHFNWFLPYNEDPSELDMTESFTINMRKKGAATTCCVALNQQVMGISGEYFSDSNLANPTPKAKDMELAKKLWDFSINMTK 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1605 537 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1605 537 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1605 537 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1605 537 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1605 537 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1605 537 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1605 537 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1605 537 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1605 537 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1605 537 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1605 537 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1605 537 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1605 537 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1605 537 Pfam Cytochrome P450 38 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1605 537 Gene3D Cytochrome P450 31 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1605 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Glsi01g1605 537 FunFam Predicted protein 297 489 - -
Glsi01g1605 537 SUPERFAMILY Cytochrome P450 38 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1605 537 Coils Coil 308 335 - -
Glsi01g1605 537 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 15 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1605 Glsi-ChrGlsi01 76996364 77000992 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1605 14 484 Cytochrome P450 AT2G45550 38.697 2.56e-118 357