Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1604 ATGAATCTAATGCCAACCTCCGAGGATAACCACCTCTTCTTCTTCCTAATCCTTTTATTGATACCTCTCTTCTTCTTACTCAAGCACGCCTTCTCCAAGAAACCCCCTCTTCCACCAGGTCCATTTCCATGGCCTATAATAGGAAACGTCTTCCAAATGGGAGATAGAACCCAACCCCTTTACGCCATTCTTGCTCACCTAGCCAGAACTTACGGCCCCCTCATGTCTCTCAGGCTCGGCACCAAAATTGCCATTATAGCCTCATCACCAACTGCTGCTAGAGAAATCCTAAAAACCCATGATCGATTCTTGTCTGGCAGGTACGTGTCAGAAGTAACTCCCATTTTCTACCCTTTCACTTTGGCTTTTTCCAGAGATTGCAGTGAGCAATGGAGGTACCTCAGAACTATCTGCAAAAGCGGGCTCTTTTCTGCAAAAGTAACAGAAGCTCAGGGAGTTTTGAGGGAGAAGAAGGTGATGGAGCTGCTGGGTTTCTTGGGTTCCAAGGAGGGTGAGGTGGTGGATCTAGGAAGGGCAGTATATGTGACTGTCACGAATATGATAAGCAATGCTCTGTTTTCTGTGGATTTTCTGGATTTTGAAGGGAAGGGGATTGGGGAAGAACTGAGAGATCTGATAAGCAGTGTGGATGAGTTGGGTCTTGTTAATTTGTCGGATATATTTTGTGTTGTGACTGGGTTGGATGTTAAGGGTCTGCAGAAGAAGAAGATGAAGATTCTGGAGAAGTTAGTCTGTGTTTGGGAGAATATAATTGAAGAAAGAAGAAAACAAGGGACGCATTGTGACCCATTGCAAAAGGATTTCTTGGATACCTTGATTGAAACTGGATTCAACGATGGCCAGATCAACCAGTTGGTCCTGAACCCTTTGAATTTTGAGCCTCAAAGGTTTGTAGAAAATGAGTTGGACTTTAAGGGCAACAACTTCGAGTTCGTGCCTTTTGGGGCAGGAAGGAGGATTTGCCCTGGTCAGCCTTTTGCCGTGAGGCAAGTTCTAATGGCTGTGGCCTCTTTGGTCCACCATTTTAATTGGTTCCTCCCTTACAATGCTGATCCCTCCGAATTGGACATGACCGAAAGCTTCACCATTAATATGCGAAAAAAGATAGACGCCCATCCACGAGTGACGACGCTTTCTAGTCTAGCAAGTCACGAACTCCAAAAACCTCCTTACCCAGTTATGGCCGGTGGTGGTGATTCTGCTCAACCATACCACCCCACCTCGAAGCCATCCAAACCCAGCACAAACTCCATTTTCAACTGCAGAAAAACCAACCTTTACTCCCTCGTCGCCGTCCTCTGCATCGTTTTTTACATCCTCGGCGCTTATCAACAGAATGGCCGCCTCATCACCACCGCCAGAACCACCAACTCTCTCCTCAAAATCCCATGTGTTAAAAAACCCACGCCTAAAAATCACCTTGATTTCTACTCCCACCATAACGCCACCGATCTCGCCGCTACAACCGTGCCGGAAACTCTAAAAAAGTACCCCCGATGCGGCGTGGAGTACAGCGAGTACACGCCGTGCGAGGACCACGGTAGATCGTTGAAGTACAAGAGGACCAGGATGATATACAGAGAAAGGCACTGCCCGGAGAAGAGGGAGCTATTGAAGTGCCGGGTTCCGGCGCCGTTCGGGTACAAGAACCCGTTTCCGTGGCCGAAGAGTAGAGATCTGGCGTGGTACGCGAACGTGCCTCATCGGGCACTCACAGTGGAGAAGGCAGTGCAGAATTGGATTCGGTTCGAAGGGAATCGGTTTCGGTTCCCTGGTGGAGGGACCATGTTTCCGAACGGTGCAGACGCGTATATTGACGACATCGGAAAGATGATTAATCTCCGAGATGGTTCTATTAGGACTGCCCTCGATACCGGCTGTGGGGTTGCTAGTTGGGGAGCCTATCTTCTGTCCCGTGACATCCTAACAGTGTCAATAGCACCAAGGGATACCCACGAAGCACAAGTTCAGTTTGCTCTTGAACGAGGAGTTCCTGCATTAATTGGAGTGATAGCCTCCAAGAGGATGCCTTTTCCTTCTAGAGCTTTTGACATGGCACACTGCTCTCGATGCCTCATCCCATGGGCTGCATATGATGGGGTTTATCTAAATGAAGTTGATCGAGTTCTACGACCTGGTGGTTATTGGATTCTATCTGGGCCTCCCATAAACTGGAAGAAGCACTGGAAAGGGTGGGAAAGAACGAAGGAGGATTTGAATGAAGAGCAGACCAAAATTGAGAAGGTAGCTAAGAGCCTTTGCTGGAAGAAGGTAGTGGAGAAACGTGATATTGCTATCTGGCAGAAACCCCAAAACCATCTAGATTGCAAAGCCCATCGTAAACTCACCCAAGACCGACCTTTCTGCCAGGCACAGGACCCCGACAAGGCCTGGTACACAGATATGCAAACTTGTTTGAGTCCTCTGCCTGAAGTGTCTGAAAAAGAAGAAACTGCTGGAAGGTCATTGGAAATTTGGCCTGACAGAGTAAATGCCGTCCCACCAAGGATTTACATGGGAACCATAAAGGGGTTTACTCCTGAAACTTTCAAGAAAGATTCTGAGTTGTGGAAGACAAGGTTGTCATATTACAAGAAAGTGAACAATCAACTAGGACATCCTGGGAGATACCGCAACCTTTTAGACATGAACGCCTACTTGGGTGGATTTGCCGCTGCACTCGTTGAGGATCCAGTTTGGGTGATGAATGTGGTTCCTGTACAGGCTAAGTTTAACACACTTGGAGTAATATATGAACGAGGATTGATTGGAATATACCATGATTGGTGTGAAGCAGTGTCTACTTACCCTAGAACTTATGACCTAATTCATGCAGATTCGCTGTTCAGCCTTTACAATGACAGATGTGAAATGGAAGACATTCTGTTAGAAATGGATAGGATTCTGAGACCAGAAGGAAGTGTGATCATTCGAGATGATGTTGATGTATTGCTCAAAGTAAAGAGTTTGGTCAACGGAATGGAATGGGAGAGTCAAATTGTGGATCATGAAGATGGCCCTCTTCAAAGGGAGAAACTTCTGTTTGCAGTCAAGAAGTATTGGACAGCTCCTCCTCCTTCTAACAATGACAATTAA 3117 0.4684 MNLMPTSEDNHLFFFLILLLIPLFFLLKHAFSKKPPLPPGPFPWPIIGNVFQMGDRTQPLYAILAHLARTYGPLMSLRLGTKIAIIASSPTAAREILKTHDRFLSGRYVSEVTPIFYPFTLAFSRDCSEQWRYLRTICKSGLFSAKVTEAQGVLREKKVMELLGFLGSKEGEVVDLGRAVYVTVTNMISNALFSVDFLDFEGKGIGEELRDLISSVDELGLVNLSDIFCVVTGLDVKGLQKKKMKILEKLVCVWENIIEERRKQGTHCDPLQKDFLDTLIETGFNDGQINQLVLNPLNFEPQRFVENELDFKGNNFEFVPFGAGRRICPGQPFAVRQVLMAVASLVHHFNWFLPYNADPSELDMTESFTINMRKKIDAHPRVTTLSSLASHELQKPPYPVMAGGGDSAQPYHPTSKPSKPSTNSIFNCRKTNLYSLVAVLCIVFYILGAYQQNGRLITTARTTNSLLKIPCVKKPTPKNHLDFYSHHNATDLAATTVPETLKKYPRCGVEYSEYTPCEDHGRSLKYKRTRMIYRERHCPEKRELLKCRVPAPFGYKNPFPWPKSRDLAWYANVPHRALTVEKAVQNWIRFEGNRFRFPGGGTMFPNGADAYIDDIGKMINLRDGSIRTALDTGCGVASWGAYLLSRDILTVSIAPRDTHEAQVQFALERGVPALIGVIASKRMPFPSRAFDMAHCSRCLIPWAAYDGVYLNEVDRVLRPGGYWILSGPPINWKKHWKGWERTKEDLNEEQTKIEKVAKSLCWKKVVEKRDIAIWQKPQNHLDCKAHRKLTQDRPFCQAQDPDKAWYTDMQTCLSPLPEVSEKEETAGRSLEIWPDRVNAVPPRIYMGTIKGFTPETFKKDSELWKTRLSYYKKVNNQLGHPGRYRNLLDMNAYLGGFAAALVEDPVWVMNVVPVQAKFNTLGVIYERGLIGIYHDWCEAVSTYPRTYDLIHADSLFSLYNDRCEMEDILLEMDRILRPEGSVIIRDDVDVLLKVKSLVNGMEWESQIVDHEDGPLQREKLLFAVKKYWTAPPPSNNDN 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1604 1038 SUPERFAMILY Cytochrome P450 32 377 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1604 1038 PRINTS E-class P450 group IV signature 287 305 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1604 1038 PRINTS E-class P450 group IV signature 312 328 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1604 1038 PRINTS E-class P450 group IV signature 328 346 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1604 1038 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 535 736 IPR029063 -
Glsi01g1604 1038 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 513 1025 IPR004159 GO:0008168
Glsi01g1604 1038 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 872 991 IPR029063 -
Glsi01g1604 1038 MobiDBLite consensus disorder prediction 402 422 - -
Glsi01g1604 1038 Pfam Cytochrome P450 295 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1604 1038 Pfam Cytochrome P450 38 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1604 1038 Gene3D Cytochrome P450 28 293 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1604 1038 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 321 330 IPR017972 GO:0005506|GO:0016705
Glsi01g1604 1038 FunFam Putative methyltransferase PMT15 582 776 - -
Glsi01g1604 1038 Gene3D Cytochrome P450 294 383 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1604 1038 Gene3D Vaccinia Virus protein VP39 608 796 IPR029063 -
Glsi01g1604 1038 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 438 1028 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1604 Glsi-ChrGlsi01 76979170 76990819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1604 295 374 Cytochrome P450 AT2G45550 47.500 1.64e-19 91.7