Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi01g1597 | ATGGCTATGGCGTTCAATCTTCAACATTTCTATCTTTTCGTGTTCCATCTCTGCTATTTGCTCGCTACCGCGGTTGTATTCCAGAATGAAGAAAACCCAGAAAAAGATTTTCTCCTTTCATTCAAAACCAGTCTAGAAAACCCCCAACTTCTTGCTTCATGGAGTTCTTCGACCCCTCACTGCAACTGGATTGGCGTCACTTGCCAACTCGGTCGAGTTACTTCACTCTCTCTTCCAACTCGGTCCCTCAAAGGCCCACTCTCTTCTTCCCTCTTCTCCATTTCTGGCCTCACCGTCCTCAACTTGTCCTCCAATGCTTTCTTCGGTGAAATTCCTCCACAGATAGCTAATCTGCGAAACTTGAAGGAGCTCAATCTTAGTGATAATCAGCTTTCTGGAGGAATTCCGAGCGAGCTTGGTGGGTTGATTCAGCTAAAAATTCTTGAGCTGGGCTCCAACTCATTTACCGGAAAATTCCCGCCGGAGCTGGGGTCATTGACAAAGCTTCAGACCCTCGACCTCTCCGGTAATGCTCTAACCGGAACCATACCGGAAAATATCGGAAACCTGACCCATCTCCAGTTCCTTGACCTCAGTAACAATCTTCTCTCAGGTTCCCTCCCGTTAACTCTCTTCACAGGAACTCTGTCTTTGATTTCCCTGGACGTTTCAAACAATTCATTTTCTGGTGCATTACCACCGGAAATTGGTAACTTGAGGAATATCACTGCCCTTTACATTGGCATTAATAAATTTATCGGTATATTGCCTTCTGAAATTGGTGAGCTGTCGCGGCTTGAGGTCTTCTATTCGCCTTCTTGTTTTATAGAAGGTCCATTGCCTGAAGAAATGTCGAAACTGAAGTCATTGACTAAACTTGACCTTTCTTACAACCCCTTGAAGTGTTTGATCCCAAAGTTTATTGGGAAGTTGCAGAATTTGAGAATACTGAACCTTGCTTTCGTGCAGCTCAATGGGTCCATACCATCTGAGCTTGGAAGTTGTAGGAACTTGCGGTCTGTTATGCTTTCTTTCAACTCGCTTTCTGGGTCATTGCCAGAGAAGCTTTCTGAGCTCCCCATGATAACATTTTCAGCTGCAAATAATCAGCTCCACGGACCGTTGCCTGCTTGGGTTGGAAAGTGGAATGGTATAAGGTCTGTTTTGCTTTCGGAAAATCGATTTTCTGGGAAAATTCCTCCTGAGCTTGGGAATTGTTCTTTACTGGAGCACCTTAGTTTGAGCAGTAACTTACTGACAGGTTCCATACCTGAGGACCTCTGTTATGCTGCTTCACTTTTGGAGATTGATCTTGATGATAACTTCCTTTCCGGTACAATTGAGAAAGCATTTACTAAGTGTAAGAACCTTACCCAGTTAGTTTTGACGAACAATCAGATTGTTGGTTCTATACCTCAGTACCTTTCAGAGCTTCCATTGATGGTGCTTGACCTAGACTCAAACAATTTTAGTGGAAATATACCTTCAAGTCTGTGGAATTCATCAACTCTAATGGAATTTTCTGCTGCTAATAACCGTTTAGAGGGCTCTCTTCCTGTGGAGATTGGGAATGCAGTTATTCTAGAGAGGCTTGTTCTTTGTAACAATCTACTGACAGGTTCTATACCTAAGGAAATTGGAAGTCTCACAAGTCTTTCTGTTCTTAATTTGAATGGAAATCTACTTAAAGGGAATATCCCAACTGAGCTTGGAGACTGCATTTTGCTGACAACATTGGACCTTGGAAATAATCAACTCAACGGGTCAATTCCAGATAAATTGGCGGAACTAAACCAGTTACAATGCCTCGTTCTTTCCCACAATAATCTGTCTGGCTCCATTCCTGCAAAACCATCTTCATATTTTAGACAACTTACCATCCCTGATTTGAGCTTTGTTCAACACCTAGGAGTATTTGATCTGTCCCACAATAGATTGTCTGGGACTATACCTGATGAATTGGGGAGCTGTGTGGTGGTTGTGGATCTTTTGATCAGCAACAACATGCTTTCTGGGAGTCTTCCAAGTTCACTCTCTCGCTTGACAAATCTTACAACCTTGGATTTGTCTGGTAACTTCTTGTCAGGTTTCATTCCACCTGATCTTGGAGATTCCCTCAAGCTACAGGGATTATATCTGGGACAGAATCAGCTCACGGGTACCATCCCTGGAAGTTTTGGAAAGATGAGTAGTCTGGTGAAGCTGAATTTGACAGGAAATAGGTTATCTGGTCCAATTCCTGATAGTTTTGGGACCATGAAAGAGCTGACACACTTGGATTTGAGCTCTAATGAGCTCAATGGCGAGCTTCCATCTTCTCTATCAGGTGTACAAAGTCTTGTTGGGCTTTACGTGCAGCAGAACAGACTTGCAGGTCAAGTAGGGGAGCTCTTCTCAAACTCCATGATATGGAGGATTGAGACAATTAATTTAAGTGATAACTACTTCAATGGGTATTTGCCAAAATCTTTGGGAAACCTGTCATACTTGACAAATTTGGATCTTCACGCAAATATGTTTACTGGAGAGATTCCTTCAGACCTTGGGAATTTAGTGCAACTGGAGTATTTTGATGTTTCTTGTAACAGGCTATCAGGAAAGATTCCTGAGAAAATATGCAACCTAGTTAATCTGAATCACCTAGATTTGTCTCAAAACAGATTGGAAGGGCCTATACCCAGAAGTGGTATTTGTCAGAATATATCCAGAGTTAGATTTACAGGGAACAAAAATCTTTGTGGGCAGATTTTGGGTCTAGATTGTCCGATCAAAAACATTGATAGATTTGCACTATTTAGCGCATGGAGACTGGCTGGAATTGCCTTTACAATCACACTCATGGCTCTAAGCATTGCTTTTGTTCTGCACCGATGGATTAGCGGGAGACAAAATGATCCTGAGGAACACAGTCGAAACCATTATGTGGATCAAAATCTTTATTTCTTGAGTAGTAGCAGGTCAAAGGAACCTTTGAGTATCAATGTAGCAATGTTTGAGCAGCCTCTTTTGAAATTAACTTTGATCGATATCCTTGAAGCTACTGACAACTTCAGCAAGACAAATATTATTGGAGATGGAGGTTTTGGAACTGTGTACAAGGCCACCTTACCTAATGGTAAAACAGTTGCTGTGAAGAAGCTGAGTGAAACTAAAACACAGGGTCATCGTGAGTTCATGGCTGAAATGGAAACTTTGGGCAAGGTAAAGCATCAGAATCTTGTTCAATTGCTTGGATATTGCTCCGTGGGTGAGGAGAAACTCCTTGTTTATGAATACATGGCAAATGGAAGCTTAGATCTTTGGTTGAGAAACAGGACGGGAGCCCTTGAAGTCCTTGACTGGGACAAACGCTACAAAGTTGCAACTGGTGCAGCTCGAGGATTAGCTTTCCTTCATCATGGGTTCATCCCCCACATTATTCACAGGGATGTTAAAGCTAGCAACATCTTGCTCAATGAAGATTTCGAGCCAAAAGTTGCAGACTTTGGAATGGCAAGACTGATCAGTGCCTGTGAGACCCATATCACCACTGACATTGCTGGAACATTTGGATACATTCCACCAGAGTATGGACAGAGTGGGAGGTCCACAACAAGAGGAGATGTCTATAGTTTTGGCGTCATTTTGCTTGAATTGCTGACTGGAAAAGAGCCAACTGGACCTGATTTCAAAGAGATTGAAGGTGGAAACTTGGTTGGATGGGTTTTTCAGACGATCAAGAAGGGGCAGGCTGCTGATGTTCTTGATCCCACGGTTCTGGATGCAGATTCTAAGCAGATGATGCTTCAAATGCTGCAGATTGCTTGTGTATGCCTCTCTGATAATCCTGCAAATAGGCCCACTATGCTTCAAGTGCTCAAGTTTCTGAAGGGGATCAAAGGAGAGTAG | 3888 | 0.4272 | MAMAFNLQHFYLFVFHLCYLLATAVVFQNEENPEKDFLLSFKTSLENPQLLASWSSSTPHCNWIGVTCQLGRVTSLSLPTRSLKGPLSSSLFSISGLTVLNLSSNAFFGEIPPQIANLRNLKELNLSDNQLSGGIPSELGGLIQLKILELGSNSFTGKFPPELGSLTKLQTLDLSGNALTGTIPENIGNLTHLQFLDLSNNLLSGSLPLTLFTGTLSLISLDVSNNSFSGALPPEIGNLRNITALYIGINKFIGILPSEIGELSRLEVFYSPSCFIEGPLPEEMSKLKSLTKLDLSYNPLKCLIPKFIGKLQNLRILNLAFVQLNGSIPSELGSCRNLRSVMLSFNSLSGSLPEKLSELPMITFSAANNQLHGPLPAWVGKWNGIRSVLLSENRFSGKIPPELGNCSLLEHLSLSSNLLTGSIPEDLCYAASLLEIDLDDNFLSGTIEKAFTKCKNLTQLVLTNNQIVGSIPQYLSELPLMVLDLDSNNFSGNIPSSLWNSSTLMEFSAANNRLEGSLPVEIGNAVILERLVLCNNLLTGSIPKEIGSLTSLSVLNLNGNLLKGNIPTELGDCILLTTLDLGNNQLNGSIPDKLAELNQLQCLVLSHNNLSGSIPAKPSSYFRQLTIPDLSFVQHLGVFDLSHNRLSGTIPDELGSCVVVVDLLISNNMLSGSLPSSLSRLTNLTTLDLSGNFLSGFIPPDLGDSLKLQGLYLGQNQLTGTIPGSFGKMSSLVKLNLTGNRLSGPIPDSFGTMKELTHLDLSSNELNGELPSSLSGVQSLVGLYVQQNRLAGQVGELFSNSMIWRIETINLSDNYFNGYLPKSLGNLSYLTNLDLHANMFTGEIPSDLGNLVQLEYFDVSCNRLSGKIPEKICNLVNLNHLDLSQNRLEGPIPRSGICQNISRVRFTGNKNLCGQILGLDCPIKNIDRFALFSAWRLAGIAFTITLMALSIAFVLHRWISGRQNDPEEHSRNHYVDQNLYFLSSSRSKEPLSINVAMFEQPLLKLTLIDILEATDNFSKTNIIGDGGFGTVYKATLPNGKTVAVKKLSETKTQGHREFMAEMETLGKVKHQNLVQLLGYCSVGEEKLLVYEYMANGSLDLWLRNRTGALEVLDWDKRYKVATGAARGLAFLHHGFIPHIIHRDVKASNILLNEDFEPKVADFGMARLISACETHITTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELLTGKEPTGPDFKEIEGGNLVGWVFQTIKKGQAADVLDPTVLDADSKQMMLQMLQIACVCLSDNPANRPTMLQVLKFLKGIKGE | 1295 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi01g1597 | 1295 | FunFam | serine/threonine-protein kinase BRI1-like 2 | 1093 | 1295 | - | - | |
Glsi01g1597 | 1295 | Pfam | Leucine rich repeat | 682 | 742 | IPR001611 | GO:0005515 | |
Glsi01g1597 | 1295 | Pfam | Leucine rich repeat | 96 | 154 | IPR001611 | GO:0005515 | |
Glsi01g1597 | 1295 | FunFam | LRR receptor-like serine/threonine-protein kinase | 144 | 214 | - | - | |
Glsi01g1597 | 1295 | SMART | LRR_typ_2 | 287 | 309 | IPR003591 | - | |
Glsi01g1597 | 1295 | SMART | LRR_typ_2 | 311 | 335 | IPR003591 | - | |
Glsi01g1597 | 1295 | SMART | LRR_typ_2 | 549 | 573 | IPR003591 | - | |
Glsi01g1597 | 1295 | SMART | LRR_typ_2 | 753 | 777 | IPR003591 | - | |
Glsi01g1597 | 1295 | SMART | LRR_typ_2 | 875 | 900 | IPR003591 | - | |
Glsi01g1597 | 1295 | SMART | LRR_typ_2 | 118 | 142 | IPR003591 | - | |
Glsi01g1597 | 1295 | SMART | LRR_typ_2 | 166 | 189 | IPR003591 | - | |
Glsi01g1597 | 1295 | SMART | LRR_typ_2 | 190 | 214 | IPR003591 | - | |
Glsi01g1597 | 1295 | SMART | LRR_typ_2 | 633 | 657 | IPR003591 | - | |
Glsi01g1597 | 1295 | SMART | LRR_typ_2 | 729 | 752 | IPR003591 | - | |
Glsi01g1597 | 1295 | SMART | LRR_typ_2 | 681 | 705 | IPR003591 | - | |
Glsi01g1597 | 1295 | SMART | LRR_typ_2 | 406 | 430 | IPR003591 | - | |
Glsi01g1597 | 1295 | SUPERFAMILY | L domain-like | 622 | 914 | - | - | |
Glsi01g1597 | 1295 | FunFam | Leucine-rich repeat receptor-like kinase | 33 | 143 | - | - | |
Glsi01g1597 | 1295 | FunFam | leucine-rich repeat receptor protein kinase EMS1 | 215 | 362 | - | - | |
Glsi01g1597 | 1295 | Pfam | Protein tyrosine and serine/threonine kinase | 1020 | 1289 | IPR001245 | GO:0004672|GO:0006468 | |
Glsi01g1597 | 1295 | PRINTS | Leucine-rich repeat signature | 875 | 888 | - | - | |
Glsi01g1597 | 1295 | PRINTS | Leucine-rich repeat signature | 756 | 769 | - | - | |
Glsi01g1597 | 1295 | FunFam | serine/threonine-protein kinase BRI1-like 2 | 978 | 1092 | - | - | |
Glsi01g1597 | 1295 | FunFam | Uncharacterized protein | 363 | 627 | - | - | |
Glsi01g1597 | 1295 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 681 | 1290 | - | - | |
Glsi01g1597 | 1295 | SUPERFAMILY | RNI-like | 304 | 616 | - | - | |
Glsi01g1597 | 1295 | Pfam | Leucine Rich Repeat | 756 | 776 | IPR001611 | GO:0005515 | |
Glsi01g1597 | 1295 | Pfam | Leucine Rich Repeat | 289 | 311 | IPR001611 | GO:0005515 | |
Glsi01g1597 | 1295 | Pfam | Leucine Rich repeat | 166 | 181 | IPR001611 | GO:0005515 | |
Glsi01g1597 | 1295 | Gene3D | Ribonuclease Inhibitor | 216 | 362 | IPR032675 | - | |
Glsi01g1597 | 1295 | Gene3D | Ribonuclease Inhibitor | 363 | 622 | IPR032675 | - | |
Glsi01g1597 | 1295 | Gene3D | Ribonuclease Inhibitor | 623 | 924 | IPR032675 | - | |
Glsi01g1597 | 1295 | SUPERFAMILY | L domain-like | 48 | 362 | - | - | |
Glsi01g1597 | 1295 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1093 | 1295 | - | - | |
Glsi01g1597 | 1295 | ProSiteProfiles | Protein kinase domain profile. | 1017 | 1295 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Glsi01g1597 | 1295 | Gene3D | Phosphorylase Kinase; domain 1 | 980 | 1092 | - | - | |
Glsi01g1597 | 1295 | Gene3D | Ribonuclease Inhibitor | 142 | 215 | IPR032675 | - | |
Glsi01g1597 | 1295 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 629 | 925 | - | - | |
Glsi01g1597 | 1295 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1139 | 1151 | IPR008271 | GO:0004672|GO:0006468 | |
Glsi01g1597 | 1295 | ProSitePatterns | Protein kinases ATP-binding region signature. | 1023 | 1046 | IPR017441 | GO:0005524 | |
Glsi01g1597 | 1295 | Gene3D | Ribonuclease Inhibitor | 33 | 141 | IPR032675 | - | |
Glsi01g1597 | 1295 | SUPERFAMILY | Protein kinase-like (PK-like) | 998 | 1289 | IPR011009 | - | |
Glsi01g1597 | 1295 | SMART | serkin_6 | 1017 | 1289 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Glsi01g1597 | 1295 | Pfam | Leucine rich repeat N-terminal domain | 32 | 68 | IPR013210 | - | |
Glsi01g1597 | 1295 | SMART | LRR_sd22_2 | 851 | 877 | - | - | |
Glsi01g1597 | 1295 | SMART | LRR_sd22_2 | 454 | 477 | - | - | |
Glsi01g1597 | 1295 | SMART | LRR_sd22_2 | 166 | 189 | - | - | |
Glsi01g1597 | 1295 | SMART | LRR_sd22_2 | 287 | 306 | - | - | |
Glsi01g1597 | 1295 | SMART | LRR_sd22_2 | 681 | 702 | - | - | |
Glsi01g1597 | 1295 | SMART | LRR_sd22_2 | 753 | 779 | - | - | |
Glsi01g1597 | 1295 | SMART | LRR_sd22_2 | 190 | 211 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi01g1597 | Glsi-ChrGlsi01 | 76914143 | 76918030 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi01g1597 | 34 | 1292 | Receptor kinase-like Gene Family | AT5G07280 | 59.543 | 0.0 | 1426 |