Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1591 ATGATTGAACCCAAAAGATTACTCACATGGAGTCACCTCCTTCTCTTCCTTCTTCATTTCGCTTATGCACAGCCAGCTACAGAACCAGCGCCGTCGTCGCCGGCGTCGGCTTCCCGCCATAGCTGGGACCTTCCTAATGCTGTTAGAATCGTAGCCTTCATCTGTGCTTTCCTCATCGTCGGCCTCTGTTCAGCCTGCCTCGACTATTGGACCGGGTTATACATCACCTCCCAGAACCAAACAGGCGGCGCCTCTGTAGATTGGCCTTGGTCCTGCTCTCAGCCCCGGGGGATCGATCGGAAAATCCTCGACACCTTCCCGATCCTCGTCTACTCCACCATCAAAGACCTCAAGATCGGAAAAGGAGCCCTTGAATGCGCAGTGTGCTTGAGTGAGTTCAAAGACTACGAGTCCCTCCGGATGATCCCAAAATGCAACCACGTCTTCCACCCTGAGTGCATCGACGTCTGGTTAGCTTCCCACGTGACTTGCCCCGTTTGTCGCGAGAAGTTGAACCCAGATTCCGGCGAAGTAGCCATCGCAGTGCCAACCCAGTTAAATGCGGGCGTTTTGGAAGAGGGAAGTGCTGGAAGAACCAGAGCCGAACTGGGTGAGAGTGAAACAGAGCAGCACCCTCAGAATGAAGGCCAGAGCAGGAAAGATCAAAATCGAAGATCAAAATGGAGAATGTTCGGGAAGCTTCCGAGGTCAAATTCGACGGGGAATTCCTTGGTTCAATCTGAGAAGGACTTGGAGAGACACAGGCTGTGGTTGCCAGAGGATGTGAGGAAGTATATTCTGCAGAACCATGGAGGAATTGGGCGTTCAGCAAGCTATAACGTGGTCATGCCAATGGTAGGTAAAGGGACGTGTGGGAGTGACAGCGAAGGAAGTAGCAGAGGTAAGACAAGCTATATTGAGCGGCAATAG 930 0.5237 MIEPKRLLTWSHLLLFLLHFAYAQPATEPAPSSPASASRHSWDLPNAVRIVAFICAFLIVGLCSACLDYWTGLYITSQNQTGGASVDWPWSCSQPRGIDRKILDTFPILVYSTIKDLKIGKGALECAVCLSEFKDYESLRMIPKCNHVFHPECIDVWLASHVTCPVCREKLNPDSGEVAIAVPTQLNAGVLEEGSAGRTRAELGESETEQHPQNEGQSRKDQNRRSKWRMFGKLPRSNSTGNSLVQSEKDLERHRLWLPEDVRKYILQNHGGIGRSASYNVVMPMVGKGTCGSDSEGSSRGKTSYIERQ 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1591 309 SMART ring_2 126 167 IPR001841 -
Glsi01g1591 309 PANTHER RING FINGER DOMAIN-CONTAINING 30 171 - -
Glsi01g1591 309 MobiDBLite consensus disorder prediction 191 225 - -
Glsi01g1591 309 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 176 IPR013083 -
Glsi01g1591 309 CDD RING-H2_EL5-like 125 168 - -
Glsi01g1591 309 ProSiteProfiles Zinc finger RING-type profile. 126 168 IPR001841 -
Glsi01g1591 309 MobiDBLite consensus disorder prediction 198 225 - -
Glsi01g1591 309 MobiDBLite consensus disorder prediction 289 309 - -
Glsi01g1591 309 FunFam E3 ubiquitin-protein ligase ATL6 90 174 - -
Glsi01g1591 309 SUPERFAMILY RING/U-box 125 174 - -
Glsi01g1591 309 Pfam Ring finger domain 125 168 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1591 Glsi-ChrGlsi01 76827057 76827986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1591 13 269 Rapid Response to Elicitors AT3G05200 36.047 1.85e-43 151