Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1540 ATGGACATCTTATACACCCTTTTCATTTTCACGGCGTTTTCCTTACTCTTTCTGATCCTCGCTTCCTCTCTCCTTATTCTCTCTTGCTTTGCCGGAAAATCCATAAGGGACCCAAGATACCCTCCTATCAAAGGCACTGTGGTAGGCCAGCTCTTCTACTTTACCAGACTCCATGACTATTTCACAGAAATTGCCAAAACCCATCGGAATTTCCGTCTTGTTGCTCCTGGGCATAGCGAATTGTACACTACGGATACACGAAATATCGAGCACGTGCTGAAAACCCAGTTCGATAATTACACCAAAGGCCAGTATAACCAAGAGATTACCAGCGATCTTTTTGGTTTGGGGATTTTCGCTGTTGATGGTGACAAATGGAGGCAGCAGAGGAAGCTTGCTAGTTATGAGTTCTCCACAAGAGTTCTAAGAGACTTCAGCTGCTCTGTCTTCAGAAGGAACTCCGCCAAATTGGTTAGAGTCATCTCAGAATTTGCCCATGCGGGTCTGGCTTTTGATATGCAGGATATGCTGATGAGATGCACTTTGGACTCCATATTTAAAGTTGGATTTGGGGTGGAATTGAATTGCTTGGAGGGATCAAGCAAGGAGGGAAAAGCTTTCATGAAAGCATTTGATGATTCAAATGCTTTAGTCTATTGGCGCTATGTCGATCCATCCTGGCCAATCAAGAAGTTTCTGAACATTGGTTCCGAAGCAACCCTCAAGAAAAACGTCAAATTAATTGATGATTTCGTTCGTGAACTAATTAAGACCAGAAGGGAATTGTTGGCAATTCAGCAGGACTCTAATGATAAGGAGGATATACTCTCGAGGTTTTTAGTAGAGAGCAAGAAGGACCCAGAGAATATGAATGATCAGTATCTGAGGGATATAATTCTGAACTTTATGATTGCTGGCAAAGACACAAGTGCTAACACTTTGTCATGGTTCTTCTACATGCTCTGCAAGCACCCTCTAGTACAGGAAAGAATTTTCCAAGAAGTCCAGGATGTTACTTGTTGCCAGGAAAATGAACCCAACATCGATGGGTTTGTGGACAAGATAACAGATTCGACCCTCGAGAAAATGCATTATCTTCACGCAGCATTGACAGAAACCTTGAGGCTGCACCCTGCAGTCCCTATGGATGGGAGGATGGCAGAAAGAGATGATATTCTTCCTGATGGCTACAGAGTGAAGAAGGGGGATGCAGTATTCTATATGCCCTATGCTATGGGCAGAATGTCTTACATTTGGGGGGATAATGCTGAGGAATTTCTACCTGAAAGGTGGCTTAAAGATGGAGTTTTTCAAACCGAATCTCCATTCAAGTTCATAGCTTTCAATGCTGGCCCGCGTATCTGCTTAGGAAAGGACTTTGCCTACAGACAGATGAAAATAGTAGCAATGGCTCTTCTTCGCTTCTTCCGGTTTAAATTGGCAAGTGAAACAGCAAGTGTGACTTATAGGACCATGTTTACACTTCACATAGACAAGGGTCTTCCTCTCTGTGCAGTTCGAAGATAA 1527 0.4322 MDILYTLFIFTAFSLLFLILASSLLILSCFAGKSIRDPRYPPIKGTVVGQLFYFTRLHDYFTEIAKTHRNFRLVAPGHSELYTTDTRNIEHVLKTQFDNYTKGQYNQEITSDLFGLGIFAVDGDKWRQQRKLASYEFSTRVLRDFSCSVFRRNSAKLVRVISEFAHAGLAFDMQDMLMRCTLDSIFKVGFGVELNCLEGSSKEGKAFMKAFDDSNALVYWRYVDPSWPIKKFLNIGSEATLKKNVKLIDDFVRELIKTRRELLAIQQDSNDKEDILSRFLVESKKDPENMNDQYLRDIILNFMIAGKDTSANTLSWFFYMLCKHPLVQERIFQEVQDVTCCQENEPNIDGFVDKITDSTLEKMHYLHAALTETLRLHPAVPMDGRMAERDDILPDGYRVKKGDAVFYMPYAMGRMSYIWGDNAEEFLPERWLKDGVFQTESPFKFIAFNAGPRICLGKDFAYRQMKIVAMALLRFFRFKLASETASVTYRTMFTLHIDKGLPLCAVRR 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1540 508 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1540 508 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1540 508 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1540 508 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1540 508 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1540 508 CDD CYP86A 71 501 - -
Glsi01g1540 508 Gene3D Cytochrome P450 33 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1540 508 Pfam Cytochrome P450 41 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1540 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Glsi01g1540 508 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1540 508 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1540 508 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1540 508 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1540 508 SUPERFAMILY Cytochrome P450 41 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1540 508 PANTHER CYTOCHROME P450 25 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1540 Glsi-ChrGlsi01 75892021 75894432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1540 1 508 Cytochrome P450 AT2G45510 62.992 0.0 684