Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1510 ATGGCTTCGGATTTGCTGAACCAACTAGATTGCGCCAAGGCCAACGCAGGATCTAACCCATGTCGAAAGGTTCGAGTCGTGGCCAAAGTCAGGGGCTTTACGGGTCCGGAGGCCGATACTCAAAGTGGGTCTTCGAGAACGGTGGACTGGATTTCGGTAAGCCAGCCCCAGGGAGAGAGGTCCGAGGGTGTCACAATCTCCTTCAGGGAAGAATCTTCCAGTCGTAGAGAATCTTATTCGGTGGACTACTGCTATGGAGAAAATGAAGAAAATGAAATTATCTATTCAAGAGACGTGAAGCCTCTTATATCAGCAGTTTTTGAAGGCCATAACAGCACTGTTATTGCATATGGAGCAAGAGGCAGTGGAAAGACTCATGTAATTCAGGGTTCTGCTGATAGACCAGGTTTGTCAGTGCTTGCGGTCACCGAGTTTCTTTCAATGGCTGAGCAAAATGGGAAATCTATTTCTGTGTCATTCTATGAGGTTGATCATCGGGACCATGCTGTTGATTTATTAAATTCAGAACAACCAGCCATTTTGGTTTTTGAAGACCGAGGCAGAATTCAGTTTAAAGGACTTTCTCAGACACCTGTGAATTCTATTTCAGAGTTTCAGAAACTATACTTCACTGCTTGTGCTGCTCGAAAGGCAGCCCTGAAAAAGGGCGGTTGCAGAAGCCATATGGGATTAATAGTGTATGTCTTTTCGGATGCAGAAAGTGCAGAAACTGGTTATGTGAGCAAAATGAATTTTGTTGACTTGGCAGGTTACGAAGATGTTAGAAAGAAAAGTAGTGATAGCTCTTGCCTTGCTGAGGCTAATAAAATTAATAGGTCTGTCTATTCTTTATTAAATGTCTGTCACGCTTTGAACACCAACGAAAGTCGTGTACCCTATCGGGAAAGCAAACTTACACGCATGTTGCAAGATTCCTTGAGAGGGACTAGCAGAATTTTGATGGTTGTCTGCATGAACCCATCTTTTTGCCAAGACACTATTTACATGGTAAGCTTGGTATCAAGGTCATGTCAAGGAATTTATCGGGCAACCACAGATTCCACTAAGAAAAGTGAAAGTTCAGCAAGACAGATAATGTTTACTTCTTATAAGACTCAGATGCTCAAGAGTGTTTCTTCTACTGCAAAAAAATTAACTGGTACCAGATCACATATAAATGAAAAGAAAGCTACCGGTGGTATAAAATCTGCAATAAAAGGAAGGAAATTATTTGATGAAGCAAGTCATTTTACTAAAGTTGAGAAGGAAAAGTCCATTGCAAAGGTTACTAAAGCATCGGTTCCTTTGTCGCTGGATAATTCATTATCAAATACTGGGAATCATGTGGAACCTAATACCAGACTGGAAAAGGATAATTCAATATCAGATACTGGGAATCATGTGGAACCCAGTCCCAGTATGGAAAAGGAGAATTCACTATCGGATACTGAGAATCATGTGGAACCCAATCCCAGACAGGATTTGGATAATTCATTTCCAAATGCTTGGAATCACATGAAACCCGAATGCATGGAGGAAAATGATGACTCTTTTTCAGATGCAAGGAATCAAGTGGAAATATATCCTCGAGTGGAAAAGGTTGTCACTGTGGAAAGTGAGGATCATCAACAGGAGCATACTCCTAATTCTGGCAATTACATGAAGACATTGTCTATAGTTCAGGAAGGTCATGACATGAACAAGGAGAACAACAGTTCAATGACCAATAAAGATGGATCGCCACCCATTAGTGCTCAACTGCGAGAACTGTCAAACAGTTTGAAATTTCTCTATTCATCAATTCCATTATGTGTGAAGGTACCTGAACAGGAATGCATATCACTTGATAATCAGGTGTCTACTGATATTGTGGAACCAACAACTCCTGTCATTGAACAAAATGTGAGAGTTAATGATGGATGGGATGTAACGAATGTCAAAAGCCCTTGGGAAACCTACAGCATGCGCAATTCTGGAATGAAGAATTCTCTTGTTCAAGAATATCTGAAGTTTTTAAACACAGCTAACAAGGAAGAATTAAAACGACTAAAGGGCATTGGAGAGAAGAGAGCAACCTTCATACTGGAGCTTCGTGAAGAATCTCCTGAACCTTTCAAGAGTCTTGATGATTTAAAGGACATTGGACTTTCAGCTAAGCAGATTAAGGGAATAATGAAAAAGGAAGTTGGAGAGCTCTTCAATTAG 2205 0.4073 MASDLLNQLDCAKANAGSNPCRKVRVVAKVRGFTGPEADTQSGSSRTVDWISVSQPQGERSEGVTISFREESSSRRESYSVDYCYGENEENEIIYSRDVKPLISAVFEGHNSTVIAYGARGSGKTHVIQGSADRPGLSVLAVTEFLSMAEQNGKSISVSFYEVDHRDHAVDLLNSEQPAILVFEDRGRIQFKGLSQTPVNSISEFQKLYFTACAARKAALKKGGCRSHMGLIVYVFSDAESAETGYVSKMNFVDLAGYEDVRKKSSDSSCLAEANKINRSVYSLLNVCHALNTNESRVPYRESKLTRMLQDSLRGTSRILMVVCMNPSFCQDTIYMVSLVSRSCQGIYRATTDSTKKSESSARQIMFTSYKTQMLKSVSSTAKKLTGTRSHINEKKATGGIKSAIKGRKLFDEASHFTKVEKEKSIAKVTKASVPLSLDNSLSNTGNHVEPNTRLEKDNSISDTGNHVEPSPSMEKENSLSDTENHVEPNPRQDLDNSFPNAWNHMKPECMEENDDSFSDARNQVEIYPRVEKVVTVESEDHQQEHTPNSGNYMKTLSIVQEGHDMNKENNSSMTNKDGSPPISAQLRELSNSLKFLYSSIPLCVKVPEQECISLDNQVSTDIVEPTTPVIEQNVRVNDGWDVTNVKSPWETYSMRNSGMKNSLVQEYLKFLNTANKEELKRLKGIGEKRATFILELREESPEPFKSLDDLKDIGLSAKQIKGIMKKEVGELFN 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1510 734 PRINTS Kinesin heavy chain signature 218 235 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi01g1510 734 PRINTS Kinesin heavy chain signature 109 130 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi01g1510 734 PRINTS Kinesin heavy chain signature 298 319 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi01g1510 734 PRINTS Kinesin heavy chain signature 249 267 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi01g1510 734 FunFam Kinesin-like protein KIN-10C 658 732 - -
Glsi01g1510 734 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 353 IPR027417 -
Glsi01g1510 734 PANTHER KINESIN-RELATED 61 572 IPR027640 GO:0003777|GO:0007018
Glsi01g1510 734 MobiDBLite consensus disorder prediction 464 478 - -
Glsi01g1510 734 Pfam Helix-hairpin-helix motif 672 720 - -
Glsi01g1510 734 MobiDBLite consensus disorder prediction 437 500 - -
Glsi01g1510 734 Pfam Kinesin motor domain 59 335 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi01g1510 734 Gene3D Kinesin motor domain 7 345 IPR036961 -
Glsi01g1510 734 Gene3D - 659 732 - -
Glsi01g1510 734 SMART kinesin_4 21 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi01g1510 734 ProSiteProfiles Kinesin motor domain profile. 23 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi01g1510 734 SUPERFAMILY RuvA domain 2-like 663 727 IPR010994 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1510 Glsi-ChrGlsi01 75181798 75198762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1510 23 328 Calmodulin-binding Proteins AT5G65930 28.391 2.24e-29 123