Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1507 ATGCCAGTTGCAAAACATAAGGCCTCTAATACTCCAGATGTCATGAAAGCAGAGGACGGAAGTGACTCCTTGGATAGCATAATCAGACAGGCAATTGGCAAAGAACCTTTCCTTTCTTTTCCAAGGGCCAGTGACAGTCCTGTTCAGTGGATTCAGTTACTTCATGCATTAGATCAGCAAGAACTGCCAGGCTGGCCTTTGCTCTCTCCTCTGAAGGTTCAGTTGCAGAAGTGTGACAAGTGTTCCCAAGAATTTTGCTCTCCAATTAATTATAGAAGACATATACGTGTTCACCATCGGTTGAAAAAGATTGATAAGGATTTTACAAAAAATAGAGATCTGTTAGGAGCATATTGGGATAAGCTCTCTGTAGAAGAGGCAAAGGAAGTTGTATCATTCAAGAATGTGATGCTGGAGGAAGTTCCAGGGTCTTCAATTTTAAAAGCTCTGACAACTCTCATTCGAAAGCAAGGATTTTCTTCACTTCCGCTGTATTATCTTAAGGCTGGATCAGCCCTTTTGGATATTGTTCAAGCTAGATCTTCCATTTTTCCTATATCTTCCAAACAGTTGTTCAGTATCCTTGATAGTGCCAGTGAAAAAACATTTTTATGTGGAACAGCAGTGTCAATGCAAAAATATATTTTTAATGGAGAGTCAGTAAAGATTGGTCTTGAACCGAAAAACCTAGTTGCTTGCACAAGCTTCTTGCTAGAACAGAAATTGGTGAAGGCATGGCTTGCTGACAAGGAAGCTGAAGCATTGAGGTGCCAGAAGCTGCTAGTGGAGGAAGAAGAAGCTGCTCAGAAAAGACAAGCTGAGATTTTGGAGAGGAAACGCCAGAAAAAGCTTAGACAAAAAGAACAAAAGGCAAGGGAGCAAAGATTTGAGGATGAGGCAGAAATAAAAGAGAATGCCAACAGCACAGTAGCGGATGTTTCATCAGCAGAAGCATCATTGAATGCCTGTGACATTGAAGCATATAATCTTGATACATTTGCTGATCATGTTCCTCTGCCACTTGGAGCCTTCCAGTGCCCAGTCACTAATGAAGGTACAGATGGGGATTCTCAGTCAGTGTATGATTGTGGTACCAATCTGAATATTGAGCTACAGACATTACAAGGACATCATCGTCGACGCGTTGCCGTTGCTCAACCAAAATCACAATTGGCTGTAGCCAATGGTTACCATGTAAATCAGAATTCTCAAATTTCCAAAGTTGGAATCATTCAGAAGTATGGAACCCACCGCAATCAAAGGGCCATTACTATACTCAATGGTAACAAAGTATGGAGCCGAAAGCTTAAACCAGAAATTGTTGGTGTAAATTCTAAAGCCATACTAGAGAAAGCACCAGACCAAGGTAAGAACCATGAAGTTTTGATTGGGTCTATATCTGTTACTCTTGGCCGTTGTAACCAATCAGAGGATAATCTGGGGGCACCTCGAGAGGACTGCATGGTGGAGAATCTAGCCAAACATAATAGTGCTCAGGAGAAGCCCATTAAATCTGATTCTGTCCAGAGCAGTAACAATCGGTTAACAGTTAAAGCTGTTAAGCTTTGGAGGCCAGTTGGTCGTCATGGAACTAAATATCCTTTGCCAGTTCAAGGTAGTGGTACAGAAGCTGATGCAATGGATGAAAAGAGAGATGATCAAAATTTGTCCTGTCACAGTTTAAGGTTGTGTGAAATAGATAGTAGTGATACTGGCTCTGGGAATAATTCCTCCCATCTAGAGGACAGAGTGGGTCCAGGAAGCTTGCAGTTATCCAGTCATGCTGCAAAAGCCTTTCTTACAGAGAGATGGAAAGAAGCTATCTCATCAAGCCACATGACATTGGTTCTGTTGTCTGACTCTGAGCCTCCTCGGTGCCAGGAGACACAGGATTGTGAACTAGCAGCATGTCAATCTTCAAATGTTGACAAATACAGCATTCTTAAAAGTGCAGAGAATCGGTTGTCTGCAACTTTTGGAGCAGCTAAATCCAAAGTCAGAATGAAGCCCGAAAAGGGTATCAAGATAAAGTACATTGCCAAACAAAAAACAGCTACCTAG 2061 0.4182 MPVAKHKASNTPDVMKAEDGSDSLDSIIRQAIGKEPFLSFPRASDSPVQWIQLLHALDQQELPGWPLLSPLKVQLQKCDKCSQEFCSPINYRRHIRVHHRLKKIDKDFTKNRDLLGAYWDKLSVEEAKEVVSFKNVMLEEVPGSSILKALTTLIRKQGFSSLPLYYLKAGSALLDIVQARSSIFPISSKQLFSILDSASEKTFLCGTAVSMQKYIFNGESVKIGLEPKNLVACTSFLLEQKLVKAWLADKEAEALRCQKLLVEEEEAAQKRQAEILERKRQKKLRQKEQKAREQRFEDEAEIKENANSTVADVSSAEASLNACDIEAYNLDTFADHVPLPLGAFQCPVTNEGTDGDSQSVYDCGTNLNIELQTLQGHHRRRVAVAQPKSQLAVANGYHVNQNSQISKVGIIQKYGTHRNQRAITILNGNKVWSRKLKPEIVGVNSKAILEKAPDQGKNHEVLIGSISVTLGRCNQSEDNLGAPREDCMVENLAKHNSAQEKPIKSDSVQSSNNRLTVKAVKLWRPVGRHGTKYPLPVQGSGTEADAMDEKRDDQNLSCHSLRLCEIDSSDTGSGNNSSHLEDRVGPGSLQLSSHAAKAFLTERWKEAISSSHMTLVLLSDSEPPRCQETQDCELAACQSSNVDKYSILKSAENRLSATFGAAKSKVRMKPEKGIKIKYIAKQKTAT 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1507 686 ProSitePatterns Zinc finger C2H2 type domain signature. 78 99 IPR013087 -
Glsi01g1507 686 MobiDBLite consensus disorder prediction 1 21 - -
Glsi01g1507 686 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 103 IPR013087 -
Glsi01g1507 686 MobiDBLite consensus disorder prediction 530 552 - -
Glsi01g1507 686 Coils Coil 266 293 - -
Glsi01g1507 686 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1507 Glsi-ChrGlsi01 75162442 75167683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1507 18 683 C2H2 Transcription Factor Family AT4G25610 43.323 5.40e-152 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Glsi01g1507 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g1507 01 75162442 75167683 Glsi01g1507 01 75162442 75167683 ECH