Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1502 ATGCCTTCATGGTGGGGGAAATCATCATCAAAAGAAACCAAGAAGAAAGGAAGTAAGGAAAGTTTTATTGACACATTACACCGCAAATTTAAAATACAATCTGACGGTAAAGTCAGCAGTAAGTCTGGAGGACCTCGTAGGCATTGCAATGACACAATTTCAGAGAAGGGGGCTCAGTCTCCAGTTGAATCAAGATCTCCTTCGCCATACAAAGTGGCAAGGTGTCAAAGTTTTACTGAAAGTACTCATGCACAGCCACTACCACTTCCTGGTCTGCACCCTTCATGTGTAGGACGAACAGATTCTGAAATTAGCATATCGACAAAATCAAGAGTGGAAAAGGGCTCCAGGCCATCGTTGTTTCCACAAATTCCAAGACCTGCATGCATACGTAATAGGATGAACCCTGCAGACTTGGATGGTGATCTTATCACTGCTTCGGTCTCTAGTGAGAGTTCTGCTGATAGTGACGAGCCAGCAGATTCATGTCATCGCAGTCCTCTAGTAACTGACTCTGAGACTGGGACTAGAACTGCTGCTGGCAGCCCTTCCAGCTTGATGCTCAAGGATCAATCATCTACTGTTTCACAACTAAATTTAAGAGAGGCCAAAAAGCCGGCAAACATTCTAAGTAATCATATATCTCCCACATCACCAAATCGGAGACCTTTAAGAAACCATGTCCCGAATCTGCAGGTTCCTCCTCATGGTGCCTTCTCTAGTGCTCCTGACAGCTCCATGTCAAGTCCATCAAGAAGTCCATTGAGAGCATTTGGCACAGAACAAGTGTTGAGCTCTGCTTTTTGGGCTGGAAAACCATTTTCAGAGGTCAATTTGGTTGGATCTGGGCACTGCTCCAGTCCGGGTTCCGGGCACAACTCTGGTCATAATTCAATGGGAGGGGACATGACAGGACAGATATTTTGGCAACCAAGCAGGGGTAGCCCCGAGTATTCTCCTGTTCCTAGTCCCAGAATGACAAGCCCTGGCCCAAGCTCTAGGATTCAGAGTGGAGCTGTCACACCTATTCATCCCAGAGCTGGGGCAACAACCACTGAATCACAGACAGGATGGGTTGATGATGGGAAACAACAGAGTCATCGTCTGCCTCTTCCTCCCTTGACAGTTACTAATTCCTCGCATTTCTCTCATTCAAATTCTGCAGCAACATCTCCATCTCTGCCAAGAAGTCCAGGAAGAGCAGATAATCCACTGAGCCCTGGCTCTCGTTGGAAAAAGGGAAAGCTGCTGGGAAGAGGCACATTTGGACATGTATATGTTGGCTTCAATAGTGAAAGTGGTGAGATGTGTGCAATGAAGGAGGTGACACTGTTTTCAGATGATGCCAAGTCTAAGGAAAGTGCTAAGCAATTAATGCAGGAAATTGCTCTATTAAGTCGTTTACGGCATCCAAATATTGTGCAGTATTATGGTTCTGAATCAGTAGGTGACAAGCTTTACATATACCTGGAGTATGTGTCCGGAGGCTCCATATATAAACTTCTTCAAGAATATGGGCAATTTGGTGAAGTAGCTATACGCAGTTATACACAACAAATTTTGTCGGGGCTTGCTTATTTACATGCTAAAAATACTGTCCACAGGGACATCAAAGGGGCGAATATACTGGTAGATCCAAGTGGCCAGGTGGTCAAGTTGGCAGACTTTGGCATGGCAAAGCATATAACAGGGCAATCATGTCCATTGTCATTCAAGGGAAGCCCTTATTGGATGGCTCCTGAGGTCATAAAGAACTCTAGTGGTTGCAACCTTGCTGTGGATATATGGAGTCTTGGATGCACAGTTTTGGAAATGGCTACAACTAAACCTCCTTGGAGTCAGTATGAAGGGGTTGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTCCCAACAATCCCAGATCACCTCTCGAATGAAGGAAAGGATTTTGTTTGGAAATGTCTACAACGTAACCCATATGATCGTCCTTCTGCAATTGAACTATTGGACCACCCTTTTGTAAAGTGTGCTGCACCTTTGGAAAGACCTATTCTGGGACCTGAAGCGTCAGATCCTGTCTCTGGTATTGCACATGGAGCAAAATCACTGGGCGTCGGGCAAGGAAGAAATCTTACTGCCTTGGATTCAGACAGACTACTTTCTGTTCATTCTTCTAGGGTATTGAAAACTAATCCACATGCCAGTGAAATCCATATTCCAAGGAATATATCTTGCCCTGTCTCTCCCATTGGAAGCCCACATTTGCGGTCAAGATCACCACAGAACATGAATGGGATAATGTCTTCCTCTCCTATATCTAGCCCCCGGACTACTTCTGGTGCATCCACGCCTCTCACTGGTGGTAGTGGTGCCATTCCATTTGGTAATCACCTGAAACAGTCAGCTTACTTTCAGGAGGGTCTTGGAAGCTTGCCAAAGCCCTCAAATGGTATCTACATTAATGCCCCTGTTCATCATGACTCAAATGTTGACATCTTTCGAGCACTGCAAATGGGGTCTCATATTTCATCAGAATCGGCTCCTAGTGAAAATGATGTTCTGGGGAAACATTTTGCTAGGCCTCCTCCTGCTGAGTCATATGATGTTCAGTCAGTCTTGGCTGATCGTGTTTACCGGCAGCTGCTGGGGGATCATGTTAAGACTAAACCATCCCTGGATCTGAGTCCCAACTCTCCTTTGCTCAACCGGACAAATGATCTATTCATTGTTTTAATAGCTGAGGAAGTGTACAATAACGGGCCAAATCACAAGAGAATCAATGTAATAAATTTGGATCTGGGAATAGACTTTTTGGGGGCACATATCCCATTTTCGTTGGCTTCCGGCTCAGGCTTGTGGAGTTCAGGTCCTTACATGGTAAGCAAACCAAGCTACATCATGAAAATTTCTGACATATGA 2901 0.4509 MPSWWGKSSSKETKKKGSKESFIDTLHRKFKIQSDGKVSSKSGGPRRHCNDTISEKGAQSPVESRSPSPYKVARCQSFTESTHAQPLPLPGLHPSCVGRTDSEISISTKSRVEKGSRPSLFPQIPRPACIRNRMNPADLDGDLITASVSSESSADSDEPADSCHRSPLVTDSETGTRTAAGSPSSLMLKDQSSTVSQLNLREAKKPANILSNHISPTSPNRRPLRNHVPNLQVPPHGAFSSAPDSSMSSPSRSPLRAFGTEQVLSSAFWAGKPFSEVNLVGSGHCSSPGSGHNSGHNSMGGDMTGQIFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAGATTTESQTGWVDDGKQQSHRLPLPPLTVTNSSHFSHSNSAATSPSLPRSPGRADNPLSPGSRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESAKQLMQEIALLSRLRHPNIVQYYGSESVGDKLYIYLEYVSGGSIYKLLQEYGQFGEVAIRSYTQQILSGLAYLHAKNTVHRDIKGANILVDPSGQVVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDHLSNEGKDFVWKCLQRNPYDRPSAIELLDHPFVKCAAPLERPILGPEASDPVSGIAHGAKSLGVGQGRNLTALDSDRLLSVHSSRVLKTNPHASEIHIPRNISCPVSPIGSPHLRSRSPQNMNGIMSSSPISSPRTTSGASTPLTGGSGAIPFGNHLKQSAYFQEGLGSLPKPSNGIYINAPVHHDSNVDIFRALQMGSHISSESAPSENDVLGKHFARPPPAESYDVQSVLADRVYRQLLGDHVKTKPSLDLSPNSPLLNRTNDLFIVLIAEEVYNNGPNHKRINVINLDLGIDFLGAHIPFSLASGSGLWSSGPYMVSKPSYIMKISDI 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1502 966 MobiDBLite consensus disorder prediction 1 20 - -
Glsi01g1502 966 Gene3D Transferase(Phosphotransferase) domain 1 409 679 - -
Glsi01g1502 966 SUPERFAMILY Protein kinase-like (PK-like) 409 750 IPR011009 -
Glsi01g1502 966 Pfam Protein kinase domain 412 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g1502 966 SMART serkin_6 411 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g1502 966 FunFam Mitogen-activated protein kinase kinase kinase 409 692 - -
Glsi01g1502 966 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Glsi01g1502 966 MobiDBLite consensus disorder prediction 33 53 - -
Glsi01g1502 966 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 64 681 - -
Glsi01g1502 966 MobiDBLite consensus disorder prediction 210 225 - -
Glsi01g1502 966 MobiDBLite consensus disorder prediction 147 254 - -
Glsi01g1502 966 MobiDBLite consensus disorder prediction 370 397 - -
Glsi01g1502 966 MobiDBLite consensus disorder prediction 347 362 - -
Glsi01g1502 966 CDD STKc_MEKK1_plant 410 668 - -
Glsi01g1502 966 MobiDBLite consensus disorder prediction 742 786 - -
Glsi01g1502 966 MobiDBLite consensus disorder prediction 167 201 - -
Glsi01g1502 966 MobiDBLite consensus disorder prediction 239 254 - -
Glsi01g1502 966 MobiDBLite consensus disorder prediction 311 413 - -
Glsi01g1502 966 ProSiteProfiles Protein kinase domain profile. 411 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g1502 966 MobiDBLite consensus disorder prediction 748 780 - -
Glsi01g1502 966 MobiDBLite consensus disorder prediction 33 97 - -
Glsi01g1502 966 MobiDBLite consensus disorder prediction 54 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1502 Glsi-ChrGlsi01 75135624 75141867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1502 1 890 MAP Kinase Kinase Kinase AT1G63700 57.989 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Glsi01g1502 Pkinase 1.8e-70 CL0016