Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1481 ATGAAGATCCAAATGGTTATTATACCTTTAATTCTTCTCCTCTTTCTTCCATGTTCCTTTTCCTTCACTCCCGCTGATAACTACCTACTCAACTGTGGATCACAGACCAATGCCTCCCTCTTCAGCCGAATCTTCATGGGCGATTCCACCAAACCAGGCTCGGATTTTCGCTCTGCAGATAAATCTATTTCGCTTACGAACCATAAGCCACCTCCAAATTTGCCCACTTTGTATCACACGGCCAGAGTTTTCACGAGCACCGCGAGCTACAGGTTCAATATGAAGAAAAACGGTACCCACTTTGTGCGTTTTCATTTCTCGCCCTTTTCAGCCCAAGGTTTTGATTTAAAATCTGCAAAATTTAGTGTCTTGGTTGATGGGAATTCGCTTCTGAGCGAGTTCCAGTTTCATAATGATACGTTGCTTAAAGAGTATATATTGAAGATAGACTCAAATTTGCTTGAAATTGTGTTTAGACCTGTGGGTAATTCTGGTTTTGGCTTTGTCAATGCTATGGAGGTTTTTACGGCTCCTGTAGATTTTATTATTGATTATGGAGTCAGGTTGGTAAGTTCTTCTGGTGCGGAAGAGTATAGAGATCTTTCATCTCAGGTTTTAGAAACTGTTCATAGGATTAATGTTGGAGGCATGAAATTAACTCCTTTCAATGACACCCTATGGAGGACTTGGATTCCTGATGAGGATTATTTGGTATTCAAGGATGCAGCTAAGCGTGCAGTGAGCACTCATACACCAAATTACCAGAATGGAGGGGCAAGTCGAGAGATCGCACCTGATAATGTTTATATGACTGCTCAGGAGATGAATAAGGAAAACTCAAGTCTGGCTTCAACATTCAATATAACTTGGAAATTTCCAGTGGCTCCTGCTGGTGTTCGACACATGGTTCGGCTGCATTTCTGTGATATCATTAGCCCTGCACTTAACTTGCTGTACTTTGATGTGTATATTAATGGGTACTCTGCATACAGGGATCTTGATTTGTCATCTCTTACAATCCATGTGCTTGCATCCCCATACTACGTGGATTTTGTTGTGGATTCTGATGATTCAGGTGCCATTCAAATAAGTGTTGGTCCTTCTGATCTGAGCAGTTCTATTAGGATGAATGCCTTGTTAAATGGTGCTGAGATCATGAAGATGGTCAATGTTATGGATTCACATTCTGGTTCTAGGAAAAAAAGTTTATGGATATTGGTGGGATCAATTGTTGGAGGAATTGTTATTTTACTACTTTTGGCAGTAGTTGCCCTTCTACTTGCTCTCAAATGCAGGAAGAAGAAACCAAAACAAAGGACGGTGGAAAGTGTAGGATGGACACCTTTACGTATGTTTGGAGGGAGTTCACTTAGTCGAATGTCAGAAGGGATAACTCATGCATCTCCAGGTTCTCATGGATATTTGGGTTTGAAAATTCCTTTTGCTGACATACAGTCAGCAACAAAAAATTTTGATAGAAGTCTGATTATAGGGTCTGGTGGGTTTGGTATGGTTTTCAAAGGTGTGCTCAGAGATAGTGTGAAGGTTGCAGTCAAGAGAGGTATGCCTGGGTCCAGACAAGGACTTCCCGAATTCCAGACTGAGATAGCAATTCTATCCAAAATTCGCCACCGCCATCTTGTTTCACTTGTTGGTTATTGTGAAGAAAATTCAGAAATGATACTAGTCTATGAGTACATGGAAAAAGGACCACTTAAAAAGCATTTGTATGGTTCAGGACAACCACCTCTTTCTTGGAAGCAGCGTCTTGAAATATGCATTGGTGCAGCTAGAGGTCTACACTATCTTCACACTGGTTTTGCGCAAGGGATCATCCACCGTGACATTAAATCAACCAATATTTTGCTTGATGAAAATTATGTGGCCAAGGTTGCTGATTTTGGTCTTTCAAGATCTGGGCCTTGTCTCAATGAAACCCATGTGAGTACTGGTGTGAAAGGAAGTTTTGGTTATCTTGATCCTGAGTATTTCCGAAGGCAGCAGCTTACTGATAAATCAGATGTTTATTCATTTGGGGTTGTGCTTTTTGAGGTTCTTTGTGCCAGACCTGCTGTTGATCCACAACTTACTAGGGAACAGGTGAATTTAGCAGAATGGGCACTTGAATGGCAGAAGAAGGGCATGCTAGAACATATTATTGATCCCCATCTTGCTGGGCAGATCAAACCTAACTCATTGAAGAAATTTGGTGAAACAGCAGAGAAATGTTTGGCTGACTATGGTGTTGACAGGCCAACTATGGGCGATGTATTATGGAATTTGGAATATGTACTTCAGATTCAAGAAAGTGGACGATTAAGGGAACCAAATGCCACTAGCAGTGATAATGAAGCAGCAGTTAATGTGACAACTACGATTGTCCCTGGAATTCCTTCCAGCAACTTAAGAACAGAGGGGGATTACTATAATGGTAATTCAGACATAAGTACTAGCCAAGTTTTTTCCCAACTAATGACCAATGAAGGCAGATAG 2493 0.4108 MKIQMVIIPLILLLFLPCSFSFTPADNYLLNCGSQTNASLFSRIFMGDSTKPGSDFRSADKSISLTNHKPPPNLPTLYHTARVFTSTASYRFNMKKNGTHFVRFHFSPFSAQGFDLKSAKFSVLVDGNSLLSEFQFHNDTLLKEYILKIDSNLLEIVFRPVGNSGFGFVNAMEVFTAPVDFIIDYGVRLVSSSGAEEYRDLSSQVLETVHRINVGGMKLTPFNDTLWRTWIPDEDYLVFKDAAKRAVSTHTPNYQNGGASREIAPDNVYMTAQEMNKENSSLASTFNITWKFPVAPAGVRHMVRLHFCDIISPALNLLYFDVYINGYSAYRDLDLSSLTIHVLASPYYVDFVVDSDDSGAIQISVGPSDLSSSIRMNALLNGAEIMKMVNVMDSHSGSRKKSLWILVGSIVGGIVILLLLAVVALLLALKCRKKKPKQRTVESVGWTPLRMFGGSSLSRMSEGITHASPGSHGYLGLKIPFADIQSATKNFDRSLIIGSGGFGMVFKGVLRDSVKVAVKRGMPGSRQGLPEFQTEIAILSKIRHRHLVSLVGYCEENSEMILVYEYMEKGPLKKHLYGSGQPPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCLNETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPQLTREQVNLAEWALEWQKKGMLEHIIDPHLAGQIKPNSLKKFGETAEKCLADYGVDRPTMGDVLWNLEYVLQIQESGRLREPNATSSDNEAAVNVTTTIVPGIPSSNLRTEGDYYNGNSDISTSQVFSQLMTNEGR 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1481 830 Pfam Malectin-like domain 30 388 IPR024788 -
Glsi01g1481 830 ProSiteProfiles Protein kinase domain profile. 491 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g1481 830 FunFam receptor-like protein kinase FERONIA 456 566 - -
Glsi01g1481 830 SMART serkin_6 491 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g1481 830 FunFam Receptor-like protein kinase FERONIA 567 784 - -
Glsi01g1481 830 Pfam Protein tyrosine and serine/threonine kinase 496 702 IPR001245 GO:0004672|GO:0006468
Glsi01g1481 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Glsi01g1481 830 FunFam Receptor-like protein kinase FERONIA 205 390 - -
Glsi01g1481 830 PANTHER OS07G0166700 PROTEIN 478 768 IPR045272 GO:0004714|GO:0006468
Glsi01g1481 830 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Glsi01g1481 830 Gene3D - 27 180 - -
Glsi01g1481 830 Gene3D - 205 390 - -
Glsi01g1481 830 CDD STKc_IRAK 497 762 - -
Glsi01g1481 830 Gene3D Transferase(Phosphotransferase) domain 1 567 786 - -
Glsi01g1481 830 Gene3D Phosphorylase Kinase; domain 1 461 566 - -
Glsi01g1481 830 SUPERFAMILY Protein kinase-like (PK-like) 475 762 IPR011009 -
Glsi01g1481 830 FunFam Putative receptor-like protein kinase 27 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1481 Glsi-ChrGlsi01 74898271 74900763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1481 5 830 Receptor kinase-like Gene Family AT3G46290 50.414 0.0 777
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi01g1481 Malectin_like 1.2e-32 CL0202