Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1480 ATGTCTGGTCAAGAGCTACCTCTATGTCTATTGCTGTGGATACTTGTCTCACTTGTCCAATTCACCAAGTTCTGTGTGGATCCTATTGGGTCGATGGATGATAAGTGTGAAAGTAGACTATATATTGGTAACCTTGATCTGAGAATAACAGAAGCAACTCTTATTAAAATGTTTTCCCCTTTTGGAAAGATTGTATCTGAGGACTTCTTGTGGCACACTCGAGGCCCAAAACGTGGGGAGCCACGTGGTTTTGCTTTTATCCAGTATAGCTCAAAAGAGGAAGCAGAATTGGCCAAGGAGAAAATGCATGGGAGGTTAGCTTGCGGTCGGCCACTGATTGTTCAACTTGCTAGTGAGAAGTACCGGTTGGAAGCAGCTGATAGCTCTTCAAAAGTAGTCGGAGAAGGGCACAAGATGCATCTTGCTGGTGGTGGCATCGGACAGACAAGCCGTAGCGCAAAAATAGCTGCAATTAAGAACAAACTGAAAGCCTTAGAGGAGGAGAGTTGTAGCTCGAAGAAACAGAAGCAAACTGATGATATATCTTGA 549 0.4408 MSGQELPLCLLLWILVSLVQFTKFCVDPIGSMDDKCESRLYIGNLDLRITEATLIKMFSPFGKIVSEDFLWHTRGPKRGEPRGFAFIQYSSKEEAELAKEKMHGRLACGRPLIVQLASEKYRLEAADSSSKVVGEGHKMHLAGGGIGQTSRSAKIAAIKNKLKALEEESCSSKKQKQTDDIS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1480 182 SMART rrm1_1 39 115 IPR000504 GO:0003723
Glsi01g1480 182 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 38 119 IPR000504 GO:0003723
Glsi01g1480 182 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 76 177 - -
Glsi01g1480 182 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 40 112 IPR000504 GO:0003723
Glsi01g1480 182 CDD RRM_RBM18 39 118 IPR039157 -
Glsi01g1480 182 SUPERFAMILY RNA-binding domain, RBD 33 123 IPR035979 GO:0003676
Glsi01g1480 182 Gene3D - 35 129 IPR012677 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1480 23 125 Eukaryotic Initiation Factors Gene Family AT1G71770 34.951 6.94e-12 61.2