Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1470 ATGTCTTCCAATGCAGCATCGTTCATGAAAGAAAAAATAACAAAATCAACCTCCTTCTTCGGAGTTCCACTATGGGTTTTGCTCGTAGCTTCCACTGCAGCATTATTCGTTGTTCTGATCTTCGTTTCTCTCTGCATTTGCTTCATCTGTTATCGTAATCGAAAACTCTCCAAATCCCAATTTTCTTTTCCGAAACCAATTGCTCCCAAGCGTTACCGTCGTGGGTTTAGCTCATCGTCCCTCGACAAGAGGCTACTGTCAGGCAATAATGTCGCAGAAATTCAGATGAACTTCGACAATCATGGCGATAAGAATGACATTGGGGAAGTTGGGTATTTGAGAGACTTGGAATCAATGGCTAGGTTCTCAAATGGAGGTGAGAATGTTATTTGGGGCCTGAGAAGGTTCAGCATTGAGGAGATTGAGGAGGCTACGGATGGACTGGCTAAAGAAAATGTGATTGGAAGTGGATATCACGGAATTGTTTATCTTGGTTTGTTGCAAGATAATACAAGGGTGGTGGTGAAGAGGCTGGCCACCGAAAGTTGCCAAAATGAGGATTTTGCATTGCATATGGAGGCAATTGGACATGTAAAACACAAGAAACTGGTCAAGTTGCTTGGATATTGTACTGATGGAGCTTACAGGATGTCAGTATCTGAATACATAGATAATGGAGATCTGCATCAATGGCTTCATGAATTTCCTGGACAAGTGAGCCCTCTAACATGGGATTTAAGATTGAAGATTATCCAAGGTGTGGCAAAAGGATTGGCCTACCTTCACGAGGATGTTGAACCAAAGATTCTCCATGGAAGCCTAAAATCTAGCAATGTATTGCTTGATCACCTATGGAATCCTAAGATCTCTGATTTTGGCCTTGCTAAGCTTTTCAATGCTCAGCGGACTCATATTATGATGGAAACTTTAGGCTACGTATCTCCAGATTATTATTCCACAATCAATTTCACTGAGAGCAATGACATTTATAGCTTTGGAATACTTATAATGGAGATTGTATCAGGGAAGATCTCTTTAGATCACAATCAACCCCAGGCACATTTAGTTGACTGGTTCAAGTTCATGATTGCCAATGAAAAGATTGATCACGTGGTGGACTCAAAGTTGCCTGAAATGCCTCCTTCCATAGAACTTAAACGAATGATCTTGGTTTCTCTTCGATGTGTAGATCCTGATGTGAATCCGAAACTCAAAATGGGAGATGTCATTCGCATGCTCGAGCCCCGTGATCTGCTTCTTTCTGATGAACACCAAATTGCTATGGAGGATTATGAACATAATCACTTTCCACACAGTCATGCTGCAGAAGGATTAGATGATAGTCCTTTAGATAGAAATAGAAGGCTAAGCAGCAGCAGCAGCAGCAATCACTGCCAGAAAAAGGCAAAAAAATAA 1416 0.4131 MSSNAASFMKEKITKSTSFFGVPLWVLLVASTAALFVVLIFVSLCICFICYRNRKLSKSQFSFPKPIAPKRYRRGFSSSSLDKRLLSGNNVAEIQMNFDNHGDKNDIGEVGYLRDLESMARFSNGGENVIWGLRRFSIEEIEEATDGLAKENVIGSGYHGIVYLGLLQDNTRVVVKRLATESCQNEDFALHMEAIGHVKHKKLVKLLGYCTDGAYRMSVSEYIDNGDLHQWLHEFPGQVSPLTWDLRLKIIQGVAKGLAYLHEDVEPKILHGSLKSSNVLLDHLWNPKISDFGLAKLFNAQRTHIMMETLGYVSPDYYSTINFTESNDIYSFGILIMEIVSGKISLDHNQPQAHLVDWFKFMIANEKIDHVVDSKLPEMPPSIELKRMILVSLRCVDPDVNPKLKMGDVIRMLEPRDLLLSDEHQIAMEDYEHNHFPHSHAAEGLDDSPLDRNRRLSSSSSSNHCQKKAKK 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1470 471 SUPERFAMILY Protein kinase-like (PK-like) 131 414 IPR011009 -
Glsi01g1470 471 ProSitePatterns Protein kinases ATP-binding region signature. 154 176 IPR017441 GO:0005524
Glsi01g1470 471 MobiDBLite consensus disorder prediction 437 471 - -
Glsi01g1470 471 FunFam Putative receptor-like serine/threonine-protein kinase 223 428 - -
Glsi01g1470 471 MobiDBLite consensus disorder prediction 437 453 - -
Glsi01g1470 471 ProSiteProfiles Protein kinase domain profile. 148 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g1470 471 Gene3D Transferase(Phosphotransferase) domain 1 223 433 - -
Glsi01g1470 471 Gene3D Phosphorylase Kinase; domain 1 122 222 - -
Glsi01g1470 471 PANTHER OS01G0323000 PROTEIN 7 425 - -
Glsi01g1470 471 Pfam Protein tyrosine and serine/threonine kinase 150 359 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1470 Glsi-ChrGlsi01 74800289 74803130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1470 136 414 Trihelix Transcription Factor Family AT5G38560 36.426 1.06e-58 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Glsi01g1470 PK_Tyr_Ser-Thr 5.9e-35 CL0016