Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1466 ATGGTATCCAATAACCCGAATCCCCCAGACGGCTTCTACTTAGATCCCAGTGGCATGGCGCTTCCTGGGCTCAGTCCATTCACCTCCGTGGCCACCGCCACGACGACGGCATCCGCCACAAACTCGTCGGAGGACCTTGCAAAGAAGATCCGGAAACCATACACTATTACCAAGTCCAGAGAGAGTTGGACTGAACCCGAGCACGACAAGTTCCTCGAGGCCCTCCAACTCTTTGACCGTGACTGGAAAAAGATTGAAGCATTTATTGGATCAAAGACAGTTATACAGATACGTAGCCATGCACAGAAATACTTTCTAAAAGTTCAGAAGAGTGGGGCAAATGAACATTTACCTCCACCCAGGCCAAAAAGAAAAGCTGCTCATCCATATCCTCAGAAAGCTTCCAACAAAAATGCTCCGGTTTTGCTTGAACCTGGATATATACAAAAGCCTGATTCCTCTGCAATGCTCAAAACTCCAATAACTAACACTGCTGTGTCTTCATGGTCAAACAACACCTTGCAGACAACTGTTAATTTATTGCATGGCACTAAAGGACCAAGGGTGAATAATTGTTGCAGTAGCAATGAGAGCACTCCTAGAGCGCGGCCAGTTGGTGAATCTACTGGTCAAGGGAATAATAGCCATTCATTGAAAGTTCTTCCTGATTTTGTACAAGTATACAACTTCATTGGCAGTGTATTTGACCCAAATGCCACTGGGCATCTGCAGAAACTAAAAAAGATGGACCCTATAGATGTTGAGACGGTGCTACTGTTGATGAGAAACCTGTCTATCAATTTAGCTAGCCCGGATTTTGAGGATCATAGAAAGCTGCTTTCGTCCTATGAGTTGGAACCGGAGACAAAATAG 873 0.4525 MVSNNPNPPDGFYLDPSGMALPGLSPFTSVATATTTASATNSSEDLAKKIRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKSGANEHLPPPRPKRKAAHPYPQKASNKNAPVLLEPGYIQKPDSSAMLKTPITNTAVSSWSNNTLQTTVNLLHGTKGPRVNNCCSSNESTPRARPVGESTGQGNNSHSLKVLPDFVQVYNFIGSVFDPNATGHLQKLKKMDPIDVETVLLLMRNLSINLASPDFEDHRKLLSSYELEPETK 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1466 290 NCBIfam myb-like DNA-binding domain, SHAQKYF class 58 107 IPR006447 GO:0003677
Glsi01g1466 290 SUPERFAMILY Homeodomain-like 54 110 IPR009057 -
Glsi01g1466 290 PANTHER SWI/SNF COMPLEX-RELATED 32 269 - -
Glsi01g1466 290 SMART sant 59 107 IPR001005 -
Glsi01g1466 290 ProSiteProfiles SANT domain profile. 58 109 IPR017884 -
Glsi01g1466 290 Gene3D - 63 110 - -
Glsi01g1466 290 MobiDBLite consensus disorder prediction 189 216 - -
Glsi01g1466 290 ProSiteProfiles Myb-like domain profile. 55 105 IPR001005 -
Glsi01g1466 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 109 IPR017930 -
Glsi01g1466 290 Pfam Myb-like DNA-binding domain 60 105 IPR001005 -
Glsi01g1466 290 CDD SANT 62 105 IPR001005 -
Glsi01g1466 290 FunFam protein REVEILLE 6 isoform X1 62 110 - -
Glsi01g1466 290 MobiDBLite consensus disorder prediction 110 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1466 Glsi-ChrGlsi01 74770902 74777381 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi01g1466 Myb_DNA-binding 6.7e-10 CL0123