Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1455 ATGGCACCAGAGTGGGTTTTCAACTTGCCAATAACATCCAAGGTGGATGTCTACAGCTATGGAATTATTGTCTTGGAGATGCTAACAGGAAGGCGCCTAACAACGGGAATTCAAACAGTTGATGGAGTAGAGACAAATAATGGGAGGTTAGTAACTTGGGTGAGAGAGAAAAGAAGCAAAGCAGCAACTGAAATGTCATATTGGGTGGAGCAAATAATTGATCCCGCAATTGAACCACAGTCTGAGTTCGAGGTGCGTAAGATGGAAACTTTGGCTAGAGTGGCTTTGGACTGTGTTGATGAAGACAAAGATGCAAGGCCCACTATGAGCCGAGTTGCTGAGATTCTTCAAAGCCATGGAAATGATTTTTCTTAG 375 0.4347 MAPEWVFNLPITSKVDVYSYGIIVLEMLTGRRLTTGIQTVDGVETNNGRLVTWVREKRSKAATEMSYWVEQIIDPAIEPQSEFEVRKMETLARVALDCVDEDKDARPTMSRVAEILQSHGNDFS 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1455 124 SUPERFAMILY Protein kinase-like (PK-like) 1 114 IPR011009 -
Glsi01g1455 124 Gene3D Transferase(Phosphotransferase) domain 1 1 123 - -
Glsi01g1455 124 Pfam Protein kinase domain 1 112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g1455 124 ProSiteProfiles Protein kinase domain profile. 1 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g1455 124 PANTHER OS07G0415500 PROTEIN 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1455 Glsi-ChrGlsi01 74339954 74340328 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1455 1 116 Receptor kinase-like Gene Family AT5G65700 32.759 1.12e-13 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Glsi01g1455 Pkinase 5e-10 CL0016