Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1440 ATGGCCGAGGACTGGGATCTCTACGCCGTCGTTCGAGGCTGCAACTCAACCCCAGAAACTCCACCAGCGACCACCAATACTACGTCGTCTGAAGATCCCCTGTCTAGCTTGGCTACTTTAACTTTCAAGGAAGAAAATTACCCGTTTTCTTTCTCCAATCTGGTTCAACCCAGAACCCATGGGTTGCAAGAGCTACAACGATTGTTCATACCCTTTAACCCCACCACCTCCACCACCACTACCACTACCACTAGTGGTAGTGGGAGTGGTGGTAGTGGGTTTGGTATCAATCCCAATTCTCCTTTTTCTGATAGTGCAGGATCCATTGAACAAGAACAGCAAAAGCATCAGCAAAATCAACTAAAAGTAGGTTATAAACAGGAATTGCAAGTTCCTCAGAGCAGTTCTGCTACGATTTTACCAAACACACAAGTTTCAACACCTAGATCAAGAAAAAGGAACTACTACAGATGCAGTAGCTCGAAAGGTTGCGCGGCCAGAAAACAAGTAGAGCGAAGCATATCTGAACCGGAGTTGTTCATCGTGACGTACACCGGAGACCACTTGCATCCTCCACCCACCCACCGGAACTCGCTGGCGGGTAGTACCCGGAACAAAATATCCACGACCCATATTCCTCAGACCCAAGGTTCCGGATCACCCAGAAGTCCCGTCAACCCCACGACGGCATTAACATCTGATCCTCTGGATGTTGAAGATGCAGCTGAGGAAACTGTTTCCACCAACGAATACCAGATCCCGGACCCGGATTTGGAGATTCAAGTAGCCTCTGATGATGATATTTTAATACCAAATATAGCTAGCATGGCGGAGGACAGCTTCATGGGTCTGCACCAACTCGGTGGCGGAGGTGGTAGCGTCAACTCTTCTGGTGGCTCGTCTCAGGCAAGTGAACCCGGGTTTGTTCCGGCTTTTAATAATGACAATCTCTCCGATAATACCCGGCCTAATCCCGGTTGA 981 0.4883 MAEDWDLYAVVRGCNSTPETPPATTNTTSSEDPLSSLATLTFKEENYPFSFSNLVQPRTHGLQELQRLFIPFNPTTSTTTTTTTSGSGSGGSGFGINPNSPFSDSAGSIEQEQQKHQQNQLKVGYKQELQVPQSSSATILPNTQVSTPRSRKRNYYRCSSSKGCAARKQVERSISEPELFIVTYTGDHLHPPPTHRNSLAGSTRNKISTTHIPQTQGSGSPRSPVNPTTALTSDPLDVEDAAEETVSTNEYQIPDPDLEIQVASDDDILIPNIASMAEDSFMGLHQLGGGGGSVNSSGGSSQASEPGFVPAFNNDNLSDNTRPNPG 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1440 326 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 153 257 IPR044810 GO:0003700
Glsi01g1440 326 Pfam WRKY DNA -binding domain 150 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi01g1440 326 MobiDBLite consensus disorder prediction 290 326 - -
Glsi01g1440 326 ProSiteProfiles WRKY domain profile. 153 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi01g1440 326 Gene3D WRKY domain 110 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi01g1440 326 MobiDBLite consensus disorder prediction 133 154 - -
Glsi01g1440 326 MobiDBLite consensus disorder prediction 288 326 - -
Glsi01g1440 326 MobiDBLite consensus disorder prediction 17 35 - -
Glsi01g1440 326 SUPERFAMILY WRKY DNA-binding domain 151 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi01g1440 326 MobiDBLite consensus disorder prediction 209 233 - -
Glsi01g1440 326 MobiDBLite consensus disorder prediction 209 236 - -
Glsi01g1440 326 SMART WRKY_cls 144 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi01g1440 326 MobiDBLite consensus disorder prediction 13 35 - -
Glsi01g1440 326 MobiDBLite consensus disorder prediction 71 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1440 Glsi-ChrGlsi01 73456778 73458076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1440 1 290 WRKY Transcription Factor Family AT4G01250 29.773 1.94e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi01g1440 WRKY 1.5e-12 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0751 06 7350061 7351353 Glsi01g1440 01 73456778 73458076 ECH
Glsi01g1440 01 73456778 73458076 Glsi01g1440 01 73456778 73458076 ECH