Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1367 ATGGATTTCGTTGAAGGCGTGGGAGAGAGCTCATCTCCACCCCGCACCTTCAGCGGTTTCAACAACTACGAAGTGAGGAATGATGTGTACAGTCGCTTAGTGGAAACCGGCCATCACCAAGCGGTGAATAATCCGGAGTTTCGTGAACAGCTGGACGCTCACTTCAACCGATTGCCTCCAAGTTACGGGCTTGATGTTAACATGGACAGAGCTGAAGATGTTTTATTGCACCAGAGTCTTCTAGCTTTGGCAAGGGACCCACAAAAGCGCCCTGTCTACCATATACGCTTTTTGGAGCCTGGGATTGGTGACAGATATGCTTTTGTCATGTTCTGTGGAATGGGAAGGGTCCAGTCCAGAATTTTTCTTGGTTTGGTGAGACTTAGGTATACCTATAATTTTGCAGTGAGTGATAAGAAGTCAGTTTGTAAAATTAGTAAGGACTGGGATGGAATGCTAAAATTTACTGATGATAGATTACTTGACACAGTTAACATTGCTACTAGAATAGATGGTGGAGATCAACAAAGTGGAAGTACTCATTCTACCCCAGGGCCATCTTCTCATGCAACTAACAGGGGAGATGTATCTTCTCATAAGAGGACAAGGGATTGCGCGGCTGAGTTTGAGCCTTGCTCTAAGCTTGAGGACCTGAAAATTGTTAATGACAATTATTCCCAGAGGCATGAACAACCAAGTGTCCCAGTTCATGAAGTTATATTTTCCTCTGTCGACAAGCCAAAGCTTTTAAGCCAGGGTTCTTGGTCTCGTTCTTTAAATTCCCATTCAGCTGTGGAGAAGGCCTTAGCAGCAGAAGCAAAACCTGGTGATTGGGAAATAGACAGAAGATTGTTGAAGATAGGAGAAAGAATAGCATCTGGATCTTGTGGAGATTTGTATCGTGGAGTTTATCTTGGTCAAGATGTTGCTGTTAAGATTCTTAGATCTGAGCATTTGAATGAAGCTTTAGAGGATGAGTTTGCTCAAGAAGTGGCAATTCTGAGGCAGGTGCATCATAAAAATGTTGTTCGTTTTATCGGTGCGTGTACAAAATCTCCACATTTGTGCATTGTGACAGAGTATATGCCTGGAGGAAGTCTGTATGACTACTTGCATAAAAATCATAATATCTTGGAGCTGTCTCATTTACTAAAGTTTGCGGTTGATGTCTGCAAGGGCATGGACTATTTGCACAGAAATAACATAATTCACAGGGATCTGAAGACGGCCAATCTGCTGATGGATCCTCACAATGTTGTTAAAGTAGCTGATTTTGGAGTTGCTCGTCTTCTAAATCAAGGGGGAGTGATGACAGCAGAAACTGGAACATACAGATGGATGGCGCCAGAGGTTATAAACCATCAACACTATGACCAGAAAGCTGATGTATTCAGTTTTTCCATAGTTCTGTGGGAACTAGTGACAGCAAAGGTACCGTATGATACCATGACTCCACTACAAGCTGCCCTGGGTGTGAGAGAGGGGCTACGCCCAGAACTTCCAAAGGAAGGGCACCCTAAACTATCATATTTGATGCAAAGATGTTGGGAAGCCATTCCAAGCAACCGGCCATCCTTCTGTGAGATAACGGTTGAATTGGAAAATCTCCTGAAAGAAGTTGGGGTGATTAATAGCAATTTTTATAACAAGAATGATTCAGAAGCTAATGGTGCTTGA 1677 0.4311 MDFVEGVGESSSPPRTFSGFNNYEVRNDVYSRLVETGHHQAVNNPEFREQLDAHFNRLPPSYGLDVNMDRAEDVLLHQSLLALARDPQKRPVYHIRFLEPGIGDRYAFVMFCGMGRVQSRIFLGLVRLRYTYNFAVSDKKSVCKISKDWDGMLKFTDDRLLDTVNIATRIDGGDQQSGSTHSTPGPSSHATNRGDVSSHKRTRDCAAEFEPCSKLEDLKIVNDNYSQRHEQPSVPVHEVIFSSVDKPKLLSQGSWSRSLNSHSAVEKALAAEAKPGDWEIDRRLLKIGERIASGSCGDLYRGVYLGQDVAVKILRSEHLNEALEDEFAQEVAILRQVHHKNVVRFIGACTKSPHLCIVTEYMPGGSLYDYLHKNHNILELSHLLKFAVDVCKGMDYLHRNNIIHRDLKTANLLMDPHNVVKVADFGVARLLNQGGVMTAETGTYRWMAPEVINHQHYDQKADVFSFSIVLWELVTAKVPYDTMTPLQAALGVREGLRPELPKEGHPKLSYLMQRCWEAIPSNRPSFCEITVELENLLKEVGVINSNFYNKNDSEANGA 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1367 558 Gene3D Transferase(Phosphotransferase) domain 1 363 556 - -
Glsi01g1367 558 ProSiteProfiles Protein kinase domain profile. 285 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g1367 558 Pfam Protein tyrosine and serine/threonine kinase 285 532 IPR001245 GO:0004672|GO:0006468
Glsi01g1367 558 CDD STKc_MAP3K-like 291 533 - -
Glsi01g1367 558 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 190 536 - -
Glsi01g1367 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Glsi01g1367 558 Gene3D Phosphorylase Kinase; domain 1 274 362 - -
Glsi01g1367 558 MobiDBLite consensus disorder prediction 170 193 - -
Glsi01g1367 558 SMART serkin_6 285 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g1367 558 FunFam Serine/threonine-protein kinase isoform 1 276 363 - -
Glsi01g1367 558 PRINTS Tyrosine kinase catalytic domain signature 461 483 IPR001245 GO:0004672|GO:0006468
Glsi01g1367 558 PRINTS Tyrosine kinase catalytic domain signature 359 372 IPR001245 GO:0004672|GO:0006468
Glsi01g1367 558 PRINTS Tyrosine kinase catalytic domain signature 504 526 IPR001245 GO:0004672|GO:0006468
Glsi01g1367 558 PRINTS Tyrosine kinase catalytic domain signature 442 452 IPR001245 GO:0004672|GO:0006468
Glsi01g1367 558 PRINTS Tyrosine kinase catalytic domain signature 396 414 IPR001245 GO:0004672|GO:0006468
Glsi01g1367 558 SUPERFAMILY Protein kinase-like (PK-like) 276 536 IPR011009 -
Glsi01g1367 558 MobiDBLite consensus disorder prediction 170 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1367 Glsi-ChrGlsi01 68507474 68535663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1367 24 99 MAP Kinase Kinase Kinase AT4G35780 51.316 1.48e-15 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Glsi01g1367 PK_Tyr_Ser-Thr 2.2e-73 CL0016