Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1356 ATGCCAACGGCTACTTTCATTCCTACAGCTGCAACAAAGCTACTGCCTCCGGCAGTGACCGTCAGAGAAGAACGCAGCAAATTAGTAGAGAATCCAGAGAATGGTCATACGGTGAGCATTACCATATCTAATCAGAACAATGGGGACACAGAAGCAAACTTGGCTCAAGTGATCAATCACTATGTGGAGACTCTATCTCACAGCAAAATGCACATTCTGGGGTACCCCACTAATCTAGATTTCGACTATGGTGCATTGGCTCAGCTGCTGGAATTTCACATAAACAATGCTGGTGATCCATTTATAGGGAACTGCTTCGCTCTCAATTCAGCAGCCTTTGAAGTTTGCGTTCTTGATTGGTTTGCTAACTTGTGGGAGATAGAGAAGAATCACTACTGGGGATACATCACCACCGGTGGAACTGAAGGCAATCTTCATGGGATATTAGTAGGAAGGGAACAATTGCCAGATGGGATACTGTATACCTCGCAAGATTCGCATTATTCAGTGTTCAAAATAGCAAAAATGTATAGAATGCAATGTGTGAAGGTTGGTACTTTGACATCTGGCGAGATTAATTGTGCTGATCTGAAGTCTTCGCTTCTTGCTCACAAGGACAAGCCAGCCATCATCAACTTAAATATAGGAACAACTATGAAAGGAGCTGTTGATGACCTAGATCTTGTGGTACAAACACTTGAAGAAAGTGGTTTCCCTCGTGATCGATTCTATATTCATTGTGATGGAGCTCTCTTTGGAATGATGCTTCCTTTCGTTAAACGAGCACCAGGGATTAGTTTCAAGAAACCTATTGGAAGCATAACTGTCTCTGGCCACAAGTTCTTGGGATGCCCTACTCCTTGTGGCGTTGTAATAACTCGTTTAGAATACATCAATGCCCTCTCTAGTGATGTTGAGATCATTGCCTCAAGGGATGCCACAATCACAGGAAGCCGTGGAGGGCATGCTCCAATCTTCCTCTGGTATGCTCTAAACAAGAAAGGCTTAAAAGGGCTCGAGAAAGAAGTGCTGATGTGCATAGCAAATGCCCGTTACTTGGCGAATCGACTCCGTGATGCTGGCATCGGCGCGATGATGAACGAGTTCAGCAGCACCGTAGTGTTTGAGAGGCCTCAAGATGATGGCTTTGCTCGTAGATGGAACTTGGCTTGCAAAGGAAACATAGCGCATATAGTGGTGATGCAGCATGTTAGTATTGAAATGTTGGACTCGTTTGTTAACGAGTTTGTTCAGAAACGTACCCTTTGCTACCAAGATGGCCAGAATCATGAACCTGTATGCATTGCAGAAGAAGTTGGTGTTGGCAATTGTGCTTGTGAATTGCATAGTTCATTATCATGGTGA 1365 0.441 MPTATFIPTAATKLLPPAVTVREERSKLVENPENGHTVSITISNQNNGDTEANLAQVINHYVETLSHSKMHILGYPTNLDFDYGALAQLLEFHINNAGDPFIGNCFALNSAAFEVCVLDWFANLWEIEKNHYWGYITTGGTEGNLHGILVGREQLPDGILYTSQDSHYSVFKIAKMYRMQCVKVGTLTSGEINCADLKSSLLAHKDKPAIINLNIGTTMKGAVDDLDLVVQTLEESGFPRDRFYIHCDGALFGMMLPFVKRAPGISFKKPIGSITVSGHKFLGCPTPCGVVITRLEYINALSSDVEIIASRDATITGSRGGHAPIFLWYALNKKGLKGLEKEVLMCIANARYLANRLRDAGIGAMMNEFSSTVVFERPQDDGFARRWNLACKGNIAHIVVMQHVSIEMLDSFVNEFVQKRTLCYQDGQNHEPVCIAEEVGVGNCACELHSSLSW 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1356 454 Gene3D Aspartate Aminotransferase, domain 1 332 420 IPR015422 GO:0003824
Glsi01g1356 454 PANTHER - 33 450 - -
Glsi01g1356 454 SUPERFAMILY PLP-dependent transferases 52 418 IPR015424 -
Glsi01g1356 454 Pfam Pyridoxal-dependent decarboxylase conserved domain 41 372 IPR002129 GO:0016830|GO:0019752|GO:0030170
Glsi01g1356 454 Gene3D - 89 331 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1356 Glsi-ChrGlsi01 68269972 68272805 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1356 215 349 Calmodulin-binding Proteins AT1G65960 29.530 4.07e-07 50.1