Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1355 ATGATCATGAGCTTAGAGCCTTCCGGCGAAGAGCAGGAAAAATTTCGTGCCAATTTCAAGATAATTTCTTCCTCATTTGCATCTTTGCCTTTTAAAATTCCTGGAACAGCATTTCATCGTGGTATCAAGGCTCGAGATAGAATGTATGCCATGTTAGATTCCACAATTTCCAGGAGAAGAAGTGGTGAAGAGTTTCAGCAGGATTTCTTGGAGTCCCTGATTATCAAACACAGCAGAGTGTCAGATGGAGAAGATTGTGAAAATAAACTCACTGATAGACAATTGAAGGACAATATCTTAACTTTGCTGGTTACAGGCCACGATACCACAACTGCTGGTCTTACATGGCTTATCAAATTTCTTGAAGAAAATCCTGCTGTTTTGGAACAACTGAGAGAGGAACACATGCAAATTATAGCGAACAGAAAGAATGGAACAGATCTTACATGGTCTGAAGTTAGTAACATGCCTTACACAGCTAAAGTGATCAGTGAAACACTTCGGAGAGCCACAATACTACCTTGGTTCTCTCGAAAAGCTTCCCAGGATTTTGAAATTGATGGATATAAGATTAACAAAGGTTGGTCAATCAACCTAGATGTTGTTTCTATACACCATGACCCAGATGTTTTCCCAGATCCTCAAAAGTTTGATCCCTCTAGATTTGATGCACCCTTAAAGCCTTTCAGCTTTCTTGAATTTGGTAGTGGACCTCGCATGTGCCCAGGAATCAACCTGGCCAAGCTTGAAATATGTGTTTTCATTCATCACCTGGTGGAGGCCTCTGGAGAAAGACGATTCCGTGCAACCAACGCTTGTAAGGATGCCAAAGAACAAGTACCCTATAATAGTCGAGCCACTGTAAACCCAGGAACTACAAGCATACAAAACAAAGAAAAATCAGAAGGAAGGTGGGGCTCTGGGACTGTGTTTCGTGAATGTAGGAACGAACCCCGCAAGGAATAA 966 0.4161 MIMSLEPSGEEQEKFRANFKIISSSFASLPFKIPGTAFHRGIKARDRMYAMLDSTISRRRSGEEFQQDFLESLIIKHSRVSDGEDCENKLTDRQLKDNILTLLVTGHDTTTAGLTWLIKFLEENPAVLEQLREEHMQIIANRKNGTDLTWSEVSNMPYTAKVISETLRRATILPWFSRKASQDFEIDGYKINKGWSINLDVVSIHHDPDVFPDPQKFDPSRFDAPLKPFSFLEFGSGPRMCPGINLAKLEICVFIHHLVEASGERRFRATNACKDAKEQVPYNSRATVNPGTTSIQNKEKSEGRWGSGTVFRECRNEPRKE 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1355 321 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 234 243 IPR017972 GO:0005506|GO:0016705
Glsi01g1355 321 PANTHER CYTOCHROME P450 26 3 260 - -
Glsi01g1355 321 MobiDBLite consensus disorder prediction 284 321 - -
Glsi01g1355 321 PRINTS E-class P450 group I signature 241 264 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1355 321 PRINTS E-class P450 group I signature 114 140 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1355 321 PRINTS E-class P450 group I signature 94 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1355 321 PRINTS E-class P450 group I signature 160 178 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1355 321 PRINTS E-class P450 group I signature 200 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1355 321 PRINTS E-class P450 group I signature 231 241 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1355 321 MobiDBLite consensus disorder prediction 284 303 - -
Glsi01g1355 321 SUPERFAMILY Cytochrome P450 9 260 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1355 321 PRINTS P450 superfamily signature 161 172 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1355 321 PRINTS P450 superfamily signature 105 122 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1355 321 PRINTS P450 superfamily signature 232 241 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1355 321 PRINTS P450 superfamily signature 241 252 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1355 321 Gene3D Cytochrome P450 1 276 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1355 321 Pfam Cytochrome P450 20 260 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1355 Glsi-ChrGlsi01 68261978 68264327 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1355 9 258 Cytochrome P450 AT5G45340 43.307 9.28e-67 214