Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1353 ATGTACAGAATGCAATGTGTGAAGGTTGGCACTTTGACATCTGGTGAGATTAATTGTGCTGATCTAAAGTCTTCGCTTCTTGCTCACAAGGACAAGCCAGCCATCATCAACCTAAATATAGGGACAACTATGAAAGGAGCTGTTGATGACCTAGATCTTGTGGTACAAGCACTTGAAGAAAGTGGATTCCCTCCTGATCGATTCTATATTCATTGTGATGGGGCTCTCTTTGGAATGATGCTTCCTTTCGTTAAACGAGAGAAAGTAGTTCTTGGTGGACCACTGGGACCAAGGATTAGTTTCAAGAAACCTATTGGAAGCATAACTATCTCTGGCCACAAGTTCTTGGGGTGCCCTATTCCTTGTGGGGTTGTAATAACTCGTTTGGAATACATCAATGCCCTCTCTAGTGACGTTGAGTACATTGCCTCGAGGGATGTCACAATCACAGGAAGCCGCGGAGGGCATGCTTCAATCTTTCTTTGGTACGCTCTGAACAAGAAAGGTTTAAAAGGGCTCGAGAAAGATGTCCAGAAGTGCATAGCAAATGCCCGTTACTTGCGGAATCGACTCCGTGATGCTGGCATCAGCGCTATGATGAACGAGTTCAACAGCACCGTTGTCACAGCCCCAAATGATAGAACACATGACCGGCATGGCATAAGGGTTTCCCCCTAG 678 0.4572 MYRMQCVKVGTLTSGEINCADLKSSLLAHKDKPAIINLNIGTTMKGAVDDLDLVVQALEESGFPPDRFYIHCDGALFGMMLPFVKREKVVLGGPLGPRISFKKPIGSITISGHKFLGCPIPCGVVITRLEYINALSSDVEYIASRDVTITGSRGGHASIFLWYALNKKGLKGLEKDVQKCIANARYLRNRLRDAGISAMMNEFNSTVVTAPNDRTHDRHGIRVSP 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1353 225 SUPERFAMILY PLP-dependent transferases 2 210 IPR015424 -
Glsi01g1353 225 Gene3D - 1 192 IPR015421 GO:0003824
Glsi01g1353 225 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 107 128 IPR021115 GO:0016831
Glsi01g1353 225 Pfam Pyridoxal-dependent decarboxylase conserved domain 9 208 IPR002129 GO:0016830|GO:0019752|GO:0030170
Glsi01g1353 225 PANTHER - 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1353 Glsi-ChrGlsi01 68195979 68197040 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1353 40 219 Calmodulin-binding Proteins AT1G65960 25.258 6.49e-08 50.4