Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1351 ATGTACAGAATGCAATGTGTGAAGGTTGGCACTTTGACATCTGGTGAGATTAATTGTGCTGATCTGAAGTCTTCGCTTCTTGCTCACAAGGACAAGCCAGCCATCATCAACCTAAATATAGGGACAACTATGAAAGGAGCTGTTGATGACCTAGATCTTGTGGTACAAGCACTTGAAGAAAGTGGTTTCCCTCCTGATCGATTCTATATTCATTGTGATGGGGCTCTCTTTGGAATGATGCTTCCTTTCGTTAAACGAGGACCAAGGATTAGTTTCAAGAAACCTATTGGAAGCATAACTATCTCTGGCCACAAGTTCTTGGGGTGCCCTATTCCTTGTGGGGTTGTAATAACTCGTTTGGAATACATCAATGCCCTCTCTAGTGACGTTGAGTACATTGCCTCGAGGGATGTCACAATCACAGGAAGCCGCGGAGGGCATGTTTCAATCTTTCTTTGGTACGCTCTGAGCAAGAAAGGTTTAAAAGGGCTCGAGAAAGATGTCCAGAAGTGCATAGCAAATGCCCGTTACTTGCGGAATCGACTCCGTGATGCTGGCATCAGCGCTATGATGAACGAGTTCAGCAGCACCGTAGTGTTTGAGAGGCCTCAAGATGATGGCTTTGTTCGTAGATGGAACTTGGCTTGCAAAGGAAACATAGCCCATATAGTGGTGATGCAGCATGTTAGTATTGCAATGTTGGACTTGTTCGTTAGTGAGTTTGTTCAGAAACGAACCGTCTGGTACGAAGATGGTCAGAATCATGAGCCTCTATGCATTGCAGATGAAGTTAGTGTTGGCAATTGTGCTTGCAAATTGCATAGTTGA 828 0.4457 MYRMQCVKVGTLTSGEINCADLKSSLLAHKDKPAIINLNIGTTMKGAVDDLDLVVQALEESGFPPDRFYIHCDGALFGMMLPFVKRGPRISFKKPIGSITISGHKFLGCPIPCGVVITRLEYINALSSDVEYIASRDVTITGSRGGHVSIFLWYALSKKGLKGLEKDVQKCIANARYLRNRLRDAGISAMMNEFSSTVVFERPQDDGFVRRWNLACKGNIAHIVVMQHVSIAMLDLFVSEFVQKRTVWYEDGQNHEPLCIADEVSVGNCACKLHS 275
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1351 275 SUPERFAMILY PLP-dependent transferases 2 243 IPR015424 -
Glsi01g1351 275 Gene3D Aspartate Aminotransferase, domain 1 156 245 IPR015422 GO:0003824
Glsi01g1351 275 PANTHER - 1 275 - -
Glsi01g1351 275 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 98 119 IPR021115 GO:0016831
Glsi01g1351 275 Gene3D - 1 155 IPR015421 GO:0003824
Glsi01g1351 275 Pfam Pyridoxal-dependent decarboxylase conserved domain 10 198 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi01g1351 Glsi-ChrGlsi01 68152476 68153642 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1351 40 186 Calmodulin-binding Proteins AT3G17760 27.329 3.55e-09 55.1