Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1349 ATGGGAATGGAGCTTTTCAATTTTCTGATCTTTCTCATCTCTGCCATTTTAGTGCTATCAGCTTTCTTATTGCTTTATTTCAGTCGTTCTCCCAAGGCAATGGAAGGCATCCCTGGCAGCCTTGGTTGGCCTATTGTGGGTGAGAGTTTCTCATTCATTTCAGACTTTTCAAGTCCTTCTGGCATATTTAGCTTCATGAACAAGAGGCAGCAGAGATATGGGAAGGTGTTCAAGAGCTTTGTCCTTGGGAGATACACTGTCTTCATGACTGGGAGAGAAGCAAGCAAGATATTGTTAACTGGGAAAGATGGGATTGTGAGCTTGAACTTGTTTTACACAGGGCAGCAAGTTCTAGGCCCCACCAGCTTGCTTCAAAGCACTGGAGAAGCACACAAGCGACTAAGGAGGATAATTGCAGAACCTTTGTCCATGGATGGTCTGAAAAAGTATTTCCATTTTATTAATACTCAGGCAATGAAGACGTTAGATCAATGGGCTGGAAGAAAAGTTCTGGTTCTTGAAGAGGCTTCTACATTTACTCTCAAAGTGATTGGACACATGATCATGAGCTTAGAGCCTTCCGGCGAAGAGCAGGAAAAATTTCGGGCCAATTTCAAGATCATTTCTTCCTCATTTGCCTCTTTGCCTTTTAAAATTCCTGGAACAGCATTTCATCGTGGTATCAAGGCTCGAGATAGAATGTATGCCATGTTAGATTCCACAATTTCCAGGAGAAGAAGTGGTGAAGAGTTTCAGCAGGATTTCTTGGAGTCCCTGATTATCAAACACAGCAGAGTGTCAGATGGAGAAGATTGTGAAAATAAACTCACTGATAGACAATTGAAGGACAATATCCTAACTTTGCTCGTTGCAGGCCATGATACCACAACTGCTGGTCTTACATGGCTTATCAAATTTCTTGAAGAAAATCCTGCTGTTTTGGAACAACTGAGAGAGGAACACATGCAAATTATAGCGAACAGAAAGAATGGAACAGATCTTACATGGTCTGAAGTTAGTAACATGCCCTACACAGCTAAAGTGATCAGTGAAACACTTCGGAGAGCCACAATACTACCTTGGTTCTCTCGAAAAGCTTCCCAGGATTTTGAAATTGATGGATATAAGATTTGCAAAGGTTGGTCAATCAACCTAGATGTTGTTTCTATACACCATGACCCAGATGTTTTCCCAGATCCTCAAAAGTTTGATCCCTCTAGATTTGATGCACCCTTAAAGCCTTTCAGCTTTCTTGGATTTGGTAGTGGACCTCGCATGTGCCCAGGAATCAACCTGGCCAAGCTTGAAATATGTGTTTTCATTCATCACCTGGTGGAGGCCTCTGGAGAAAGACGATTCCGTGCAACCAACGCTTGTAAGGATGCCAAAGAACAGGTACCCTATAATAGTCGAGCCACTGTAAACCCAGGAACTACAAGCATACAAAACAAAGAAAAATCAGAAGGAAGGTGGGGCTCTGGGACTGTGTTTCGTGAATATAGGAACGAACCCCGCAAGGAATAA 1524 0.4252 MGMELFNFLIFLISAILVLSAFLLLYFSRSPKAMEGIPGSLGWPIVGESFSFISDFSSPSGIFSFMNKRQQRYGKVFKSFVLGRYTVFMTGREASKILLTGKDGIVSLNLFYTGQQVLGPTSLLQSTGEAHKRLRRIIAEPLSMDGLKKYFHFINTQAMKTLDQWAGRKVLVLEEASTFTLKVIGHMIMSLEPSGEEQEKFRANFKIISSSFASLPFKIPGTAFHRGIKARDRMYAMLDSTISRRRSGEEFQQDFLESLIIKHSRVSDGEDCENKLTDRQLKDNILTLLVAGHDTTTAGLTWLIKFLEENPAVLEQLREEHMQIIANRKNGTDLTWSEVSNMPYTAKVISETLRRATILPWFSRKASQDFEIDGYKICKGWSINLDVVSIHHDPDVFPDPQKFDPSRFDAPLKPFSFLGFGSGPRMCPGINLAKLEICVFIHHLVEASGERRFRATNACKDAKEQVPYNSRATVNPGTTSIQNKEKSEGRWGSGTVFREYRNEPRKE 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1349 507 MobiDBLite consensus disorder prediction 470 507 - -
Glsi01g1349 507 PANTHER CYTOCHROME P450 26 34 446 - -
Glsi01g1349 507 Pfam Cytochrome P450 38 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1349 507 PRINTS E-class P450 group I signature 300 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1349 507 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1349 507 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1349 507 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1349 507 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1349 507 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1349 507 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1349 507 CDD CYP90-like 69 454 - -
Glsi01g1349 507 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1349 507 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1349 507 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1349 507 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1349 507 SUPERFAMILY Cytochrome P450 31 446 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1349 507 Gene3D Cytochrome P450 28 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1349 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Glsi01g1349 507 FunFam Cytochrome P450 family 722 subfamily A polypeptide 1 27 475 - -
Glsi01g1349 507 MobiDBLite consensus disorder prediction 470 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1349 Glsi-ChrGlsi01 68104862 68107998 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1349 3 445 Cytochrome P450 AT1G19630 35.412 2.69e-93 289