Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1347 ATGGCATCTAACGAAGCCAAATTCGCCCTTCAAAACCATGACCTAGAGCAACAAACCACTGCTCTAGAGATTGAAATCAATGAAAAAGACTTTGATTATTCCAAACGAGCTCAATGGCTAAGGGCTGCAGTTTTGGGAGCCAATGATGGGTTGGTTTCCACAGCCTCTCTCATGATGGGTGTAGGTGCAGTGAAGCAAGACATTAAGGCCATGATCTTATCTGGGTTTGCTGGGTTGGTGGCCGGGGCCTGTAGTATGGCCATAGGAGAGTTTGTGTCTGTGTACTCCCAGTTGGAAATAGAGGTTGCACAAATTAAAAGAGAGAAACAAAAGAAGATTAATAATAATGGTGGAGGAGGAGGGGGGATTGAAGAAGAGGTTGAAGGGAAAGAGGGTTTGCCAAACCCTTTACAAGCAGCAGCAGCTTCAGGTTTGGCATTTTCTGTTGGTGCAATGGTGCCATTGCTTGCAGCCTCCTTTATTAGGGAGTATAGGATGAGGCTAGGAGTGGTGGTGGGTGCAGTGAGCTTGGCTTTGCTGGTATTCGGATGGTTAGGTGCAGTTTTGGGTAAGGCTGGAGCTATGAGGGCTATGATCAGGGTCTTGGTTGGGGGTTGGCTAGCCATGGCCATAACTTTTGGGCTAACCAAGTTGATTGGGTCAAGTGGGCTTTAA 675 0.4726 MASNEAKFALQNHDLEQQTTALEIEINEKDFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILSGFAGLVAGACSMAIGEFVSVYSQLEIEVAQIKREKQKKINNNGGGGGGIEEEVEGKEGLPNPLQAAAASGLAFSVGAMVPLLAASFIREYRMRLGVVVGAVSLALLVFGWLGAVLGKAGAMRAMIRVLVGGWLAMAITFGLTKLIGSSGL 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1347 224 Coils Coil 95 115 - -
Glsi01g1347 224 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 16 219 IPR008217 GO:0005384|GO:0030026
Glsi01g1347 224 Pfam VIT family 40 115 IPR008217 GO:0005384|GO:0030026
Glsi01g1347 224 Pfam VIT family 129 216 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1347 Glsi-ChrGlsi01 68061871 68062545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1347 12 224 Nodulin-like Gene Family AT3G43660 65.258 2.18e-95 275