Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1341 ATGACTCGCTCGCCCCCACAATACACCCTTGTAATTTATAGAGAGCTAGCCTTGCCCCGTCTTGTCCGCGTTCTTCACTCAGTCTATTGTCTCCTTTTTAGCTGGGGTTCTTTCTCACTGTCTTTTCCTCCTCCTGAGTCAGTTGTGAGGTGTAATGGGTTCAGTGGTCTGATTTGGGTTGAAGAAGCAATGGAAGGAAATTTGCCTCAAGGCGGTATTATTCCAGCGTTTGCTGGTTTTGATTTGCCAGGATCAATGCGAGTTCATCAGCAAGGAGAGCACCCCCATAACATGCAACAACATCAAACTCATCTACGCCAAGGTCCTTCAGTACATTCCTCGGTTCATGATGGTTTTCCGCTTACCATGGGAACCTTGCAGAACTGCGATCAAACCATTACAACGGCAGACTTTACTAAGGGAGATAGAAGCAAAAACTCTGCAAGTGAGGAGGATGAGCCAAGCTTTACGGAAGATGTAGTTGATGGTCACAATGAAGCAGGTAGAGGGAAAAAGGGTTCACCTTGGCAACGTGTGAAGTGGACCGACAAGATGGTGAAGCTTCTGATAACAGCTGTTTCTTATATAGGTGAGGATGCAACTTCTGACAGTGGCGGTGGAGGAAGAAGGAAATTTGCAGTCCTACAAAAGAAGGGTAAGTGGAAATCTGTTTCCAAGGTTATGGCTGAAAGGGGTTATCATGTTTCACCTCAACAATGTGAGGATAAATTCAATGATCTTAATAAAAGGTATAAAAAGCTTACTGATATGCTTGGGAGGGGCACTTCTTGTCATGTTGTTGAGAACCCAGCTCTGTTGGATGTAATAGATTATCTTTCAGAGAAAGATAAGGATGATGTTCGAAAGATATTAAGCTCAAAACACCTGTTCTATGAAGAGATGTGTTCTTACCATAATGGTAATAGATTGCATTTACCCCATGATCCAGCATTGCAACGTTCACTGCAGTTAGCACTTAGAAATAGAGATGATCATGATTATGATGATATCAGAAGGGCCCATCATGATGATCATGATGAAGATGATGAAGATATGGATACTGATGATCATGATGAATTTGAAGAGACTCACACTTCCCAGCGAGATAATCGAGGAGTATTTTGGGGATATATGAAGAAATTTAAACAAGGTCAAGGCCAAGAAGAAACTAGTACATTTGGGAATTCCTTAAATTGTCAGGACTACAACAAAAGTTCTTATCCCCATGGACAGATGGTCCAACATGATGTAAATCAAGGTTTACCTGAAAGCATGAGAGCAGCTTGGCTACAGAAGCAATGGATTGAATCTCGTTCTCTTCAATTAGAAGAGCAGAAGCTACAAATTCAGGTTGAGATGTTAGAACTGGAGAAACAGAGATTCAAGTGGCAGAGGTTTAGTAGGAAAAAGGACCGGGATTTGGATAAGCTGAGGTTGGAAAATGAACGAATGAGGCTTGAAAATGAGCGTATGGCTTTGGAACTAAAGAGAAAGGAGATGGGCAGTGGCTTTAGTTAG 1518 0.4209 MTRSPPQYTLVIYRELALPRLVRVLHSVYCLLFSWGSFSLSFPPPESVVRCNGFSGLIWVEEAMEGNLPQGGIIPAFAGFDLPGSMRVHQQGEHPHNMQQHQTHLRQGPSVHSSVHDGFPLTMGTLQNCDQTITTADFTKGDRSKNSASEEDEPSFTEDVVDGHNEAGRGKKGSPWQRVKWTDKMVKLLITAVSYIGEDATSDSGGGGRRKFAVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLTDMLGRGTSCHVVENPALLDVIDYLSEKDKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQRSLQLALRNRDDHDYDDIRRAHHDDHDEDDEDMDTDDHDEFEETHTSQRDNRGVFWGYMKKFKQGQGQEETSTFGNSLNCQDYNKSSYPHGQMVQHDVNQGLPESMRAAWLQKQWIESRSLQLEEQKLQIQVEMLELEKQRFKWQRFSRKKDRDLDKLRLENERMRLENERMALELKRKEMGSGFS 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1341 505 MobiDBLite consensus disorder prediction 137 175 - -
Glsi01g1341 505 MobiDBLite consensus disorder prediction 339 365 - -
Glsi01g1341 505 Pfam Myb/SANT-like DNA-binding domain 178 304 IPR044822 -
Glsi01g1341 505 Gene3D - 181 253 - -
Glsi01g1341 505 PANTHER F16F4.11 PROTEIN-RELATED 64 501 - -
Glsi01g1341 505 FunFam Sequence-specific DNA binding transcription factor 181 253 - -
Glsi01g1341 505 Coils Coil 467 499 - -
Glsi01g1341 505 Coils Coil 437 459 - -
Glsi01g1341 505 MobiDBLite consensus disorder prediction 143 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1341 Glsi-ChrGlsi01 67994665 67996617 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi01g1341 Myb_DNA-bind_4 1.7e-23 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g1341 01 67994665 67996617 Glsi01g1341 01 67994665 67996617 ECH