Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1338 ATGATACTCGGCGAAGATCTTTTATCAAATAGCAAATATCAACCTGCCTATGTGAGAAATGCAGTTTTCCAGGCAAACTTGCAACGTTCACATCATGACATGAAAACAAAACAGCTTTATAAGAGATCACAGAAGAACTTAGAAAATTTGATGGGATATATCACTCATATCGTCCTTGCCATTCGTCGTGCAACTCGTTCTTGTATGCGTAAGGGTACTGGGTTTGCAGGGCTTGTGCCTTACAAAGCTTTAGATATTAATCCTTGTACTTTGTTTTCCAAGGCTGCAATTGCCAAGGGAATGAACCCTTATGTATTTGTTGTTTATCGGCAAGCCTTCGCATTGCTTGCGTTGTCTCCCTTCGCTTTCTTCGACAGGTTAACACTGAGTTCAAACCTTTACTATGTTGCAATCAACAATACCTCTGCAACATTTGCTGCAGCCACCACAAACACCATCCCTGCCATTACTTTTTTCATGGCTGTTATAATTAGGGTGGAAAGCATTTCCTTGAAGCATATGCATGGGATGGCCAAAATTTTGGGTTCTATTCTGAGCCTTTCAGGGGCAATAATATTTGCTTTAGTCAAAGGACCTCCTGTAGGTTTCATGAAGTGGTATCCCGCAAACCAGAAGCATATCTCTCATTCATTAACAACAGTTCATTCCAAAGGGGATTTTGTCAAAGGATCTCTTACGATGCTCTCAGCAAACACTGCTTGGTGTTTGTGGCTTATTTTGCAGGGCTTCGTTGTAAAGCAATACCCAGCAAAATTTCGCCTCACTACTCTACAATGCTTCTTTAGCTGCATACAATCAGCCGTTTTGGCTGTCACAGTGGAAAGAGATCCTTCAGCATGGAAGCTTGGATGGGACATTCACCTTCTTTCGGTGGCATACTGTGGTGTAATTGTAACAGGGGTTGGTTATTGGCTGCAAGTGTGCACTATAGAGGAGAAAGGCCCAGTTTTCACTGCAATGTTCACCCCTCTTGCTCTTGTAATCACTGCAATATTCTCAGCACTTTTGTGGAAAGAAACACTTCACTGGGGAAGTATTGGTGGCACTATTTTGTTGGTGATTGGGCTCTACAGCGTCTTGTGGGGGAAGAACAAAGAGAGTGATGAAAGGGGCCCAATCCATCAAGACACAGAGGAAACCAGATTGGAGTGCATTACACAGAAGTGA 1188 0.4276 MILGEDLLSNSKYQPAYVRNAVFQANLQRSHHDMKTKQLYKRSQKNLENLMGYITHIVLAIRRATRSCMRKGTGFAGLVPYKALDINPCTLFSKAAIAKGMNPYVFVVYRQAFALLALSPFAFFDRLTLSSNLYYVAINNTSATFAAATTNTIPAITFFMAVIIRVESISLKHMHGMAKILGSILSLSGAIIFALVKGPPVGFMKWYPANQKHISHSLTTVHSKGDFVKGSLTMLSANTAWCLWLILQGFVVKQYPAKFRLTTLQCFFSCIQSAVLAVTVERDPSAWKLGWDIHLLSVAYCGVIVTGVGYWLQVCTIEEKGPVFTAMFTPLALVITAIFSALLWKETLHWGSIGGTILLVIGLYSVLWGKNKESDERGPIHQDTEETRLECITQK 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1338 395 Pfam EamA-like transporter family 129 187 IPR000620 GO:0016020
Glsi01g1338 395 Pfam EamA-like transporter family 229 367 IPR000620 GO:0016020
Glsi01g1338 395 PANTHER WAT1-RELATED PROTEIN 90 381 IPR030184 GO:0016020|GO:0022857
Glsi01g1338 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 291 372 - -
Glsi01g1338 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 109 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1338 Glsi-ChrGlsi01 67910263 67919863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1338 100 383 Nodulin-like Gene Family AT1G44800 35.621 9.95e-68 217
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g1338 01 67910263 67919863 Glsi01g1338 01 67910263 67919863 ECH