Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1326 ATGGCGTCGTTGAAGGTGATGGCGTCGTCGAATTCAAGAAAATCGGATCTATCGCGACGATCTTCTTCTGCGAGTAGCCAATCCTTACTTACAGATCAGACAACTCAGGCGAAGAAAATTAGTCGCAGCGGCAGCGCCAATTTTGTCTCAATGACCGTCGATGGCATTCTTCGCGACGTTTATGACTCCGCACCCACGACGGAGTCCACCCTCCTCGACGCCCAGATAACCTTAATTGATACTCCAGCCAACGGCGCAACTACCTCCGCCGACGGTGGCAACTCCATTGGTGGGTCCTCGAATGTTCCGAAAACCATGGATGATGCTTGGAGGGAGATGATTTCAGGTGATAGAAGGGAGTGCAAGGAGGAGGTGCCCGATGATATGATGACTCTAGAGGATTTTCTGACCAAGGCTGGGGCCATGGAGGAAGATGATGTGAAAATGCCAGTGCCGCTCACCGAGCGGTTGAGTGGGGGAATGTTTACGTTTGATCCTATTCAGCCAAGCCCGTATCAGGCGTTGGATAAAGTTGAAGGATCGGTTATTGGGTTCGGGAATGGAGTGGAGGTGATTGGAGCAGGAGGAGGAAGAAGAAAGAGAGGGCGCCCTGTTTTGGAGCCGTTGGATAAAGCTGCACAGCAGAGGCAAAGGAGAATGATCAAAAATAGAGAATCTGCAGCAAGGTCTAGGGAACGGAAGCACGCTTACCAAGTTGAATTGGAGTCCATAGCGGTGAGACTAGAGGAGGAAAATGAGCAGCTGTTGAAGGAAAAGGCGGAGAGGAGCAAGGAAAGGTACAAGCAGCTTATGGAAAAGGTCATCCCCCTTGGGGAGCAGCGAAAGCCGCCACGTGTGCTCCGAAGGGTTAACTCATCCCAGTGGTAG 888 0.5169 MASLKVMASSNSRKSDLSRRSSSASSQSLLTDQTTQAKKISRSGSANFVSMTVDGILRDVYDSAPTTESTLLDAQITLIDTPANGATTSADGGNSIGGSSNVPKTMDDAWREMISGDRRECKEEVPDDMMTLEDFLTKAGAMEEDDVKMPVPLTERLSGGMFTFDPIQPSPYQALDKVEGSVIGFGNGVEVIGAGGGRRKRGRPVLEPLDKAAQQRQRRMIKNRESAARSRERKHAYQVELESIAVRLEEENEQLLKEKAERSKERYKQLMEKVIPLGEQRKPPRVLRRVNSSQW 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1326 295 Pfam bZIP transcription factor 213 273 IPR004827 GO:0003700|GO:0006355
Glsi01g1326 295 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 27 291 IPR043452 GO:0003700|GO:0045893
Glsi01g1326 295 MobiDBLite consensus disorder prediction 1 42 - -
Glsi01g1326 295 CDD bZIP_plant_BZIP46 215 261 - -
Glsi01g1326 295 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 213 265 IPR004827 GO:0003700|GO:0006355
Glsi01g1326 295 SUPERFAMILY Leucine zipper domain 215 266 IPR046347 GO:0003700|GO:0006355
Glsi01g1326 295 Coils Coil 234 273 - -
Glsi01g1326 295 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 218 233 IPR004827 GO:0003700|GO:0006355
Glsi01g1326 295 Gene3D - 213 272 - -
Glsi01g1326 295 SMART brlzneu 211 275 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1326 Glsi-ChrGlsi01 67700735 67703776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1326 1 295 bZIP Transcription Factor Family AT5G44080 48.758 1.29e-81 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi01g1326 bZIP_1 5.1e-12 CL0018