Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1305 ATGGCCATATTCTTTGCATGCATATTTTTTGCCTACAGATGGGCGAAGAAGACCTCACGACCCCAGCCATCGGCTCGACCCTTGCAAAACCCGGACGTTTTTGCCATCTCTGTTCATGAGAGCTGCTGGTCTTTCAAACTGCAAGTACTGATCTCCATGGAAGAACTTGCCAAATCCACCAATAACTTCTCGCCGGACCTCATCATTGGTGCCGGAAGTTTCAGCCTCGTCTACAAGGCGAAGCTCTCGAATGGCCTCGTAGTAGCCGTCAAGAAGCTCTCGGAGGAAGACTTCCATGGATTTCAGAAATTCCAGGCCAAGGTGAAATCTCTAGGTAAGCTGCGACACCGAAATATAGTGAAAATTCTCGAGTCATGTGCATCGGGTCCCGAGAGATTTTTGATCTATGAGTTCATGGAGAAAGGGAGTCTCGATAAATGGCTGCACAACCCGATAGGATATGTATTATCACTAACTTGGGAAACGAGGGTGAAGATCATTAGGGGTGTGGCTAATGGGCTGTGTTACTTACATGGGATGGAAAAGCCTTTTATCCATAGGAACATGAAGCCCAGTGAAGTGTTGTTGGATTTTGAATATATGGCCCATATAGGAGATTTTAGGCTTACAAGGACGATTGCCTCGTCAGATTCTCACTCATCACATTCTCATGTGTCCAGTGAATGTATGGGTTCCAGGAGCTACCTAGCCCCAGAGTATAAAGATGGTCAAACTGTGGCTACTGTAAAGATGGATGTGTACAATTTTGGAGTTTTAATGTTAGAAACTGGCATGGGTCGTCGGCCGAATGAGACAATAGAGTTTGTTGCAAAAGCCATGAAAAGGGTGGCCCAAAATGCAGAAATGGATATGGTTGATTCCAATATTTCAAGGGCGGAAAGAATAAGTGAAGTTAGTATTAAGGAGTATTTTAGAATTGCTTGCTTGTGCTGTAGTGAATCACCAAGACAAAGGCCTAAAATGACAGAGATAGTGAAATTGTTGAATAAGATGCCAGTGTGA 1023 0.4428 MAIFFACIFFAYRWAKKTSRPQPSARPLQNPDVFAISVHESCWSFKLQVLISMEELAKSTNNFSPDLIIGAGSFSLVYKAKLSNGLVVAVKKLSEEDFHGFQKFQAKVKSLGKLRHRNIVKILESCASGPERFLIYEFMEKGSLDKWLHNPIGYVLSLTWETRVKIIRGVANGLCYLHGMEKPFIHRNMKPSEVLLDFEYMAHIGDFRLTRTIASSDSHSSHSHVSSECMGSRSYLAPEYKDGQTVATVKMDVYNFGVLMLETGMGRRPNETIEFVAKAMKRVAQNAEMDMVDSNISRAERISEVSIKEYFRIACLCCSESPRQRPKMTEIVKLLNKMPV 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1305 340 PIRSF ILK 49 340 - -
Glsi01g1305 340 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 337 - -
Glsi01g1305 340 Gene3D Phosphorylase Kinase; domain 1 33 138 - -
Glsi01g1305 340 FunFam Phytosulfokine receptor 2 24 138 - -
Glsi01g1305 340 SUPERFAMILY Protein kinase-like (PK-like) 41 335 IPR011009 -
Glsi01g1305 340 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Glsi01g1305 340 ProSiteProfiles Protein kinase domain profile. 63 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g1305 340 Gene3D Transferase(Phosphotransferase) domain 1 139 340 - -
Glsi01g1305 340 Pfam Protein tyrosine and serine/threonine kinase 69 335 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1305 Glsi-ChrGlsi01 67015748 67016770 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1305 51 338 Receptor kinase-like Gene Family AT5G07280 38.255 2.19e-57 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Glsi01g1305 PK_Tyr_Ser-Thr 2.1e-37 CL0016