Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1303 ATGAATCCTCCGCTTGAAGCGTTCCTCATTGGACTCTTAGCCGGAGTCATCGTCTTGGCAATGGTCTTTGCAGCCGTAGTCTATGCCTACAGACGGAAGAAGGAGACCTCACAACCCCAGCTGCGGACTCGACGCTTGCAAAACCTGGAGCTCTCTGCCATCTCTGTTCATCAGAACTGGTCTTTCCACCCGCATGTACTGATCTCCATGGATGAGATCGCCAAAGCCACTAATAACTTCTCGCCGGACCTCATCGTCGGTGCCGGAAGTTTCAGCCTCGTCTACAAGGCTCAGCTTTCCACCGGCCGTGTAGTAGCTGTCAAGAAGCTCTCGAAGGGAGCCTTCCATGGATTTCGGAACTTCCAGGCCGAGGTGAAATCTCTAGATTTTGGGCTTGCAAGAATGATTTCCCCATTAGATTCTCATGTGTCCTCCCAATTTACCGGTTCCAGCGACTACATGGCCCCAGAGTATAGAGATGGGCAAACTGTGGCTACTGTGAAGATGGATGTGTACAGTTTTGGAGTTTTGATGTTGGAAACCGCTGTGAGTGGTCGGCCCAATGGGGAAAAAGGGTTTGTGACAGAAGTCATAAATATGGTGGCCCAAAACAGAGAAATGGATATGGTTGATTTCAATATTTCAAGGGATGGAAGAATAAGTGAAGCTAGTATTAAGGAGTATTTTAGAATTGCTTGCATGTGCTGTAGTGAATTGCAGAGAGAAAGGCCTGAAATGGCAGTGATTGTGGAACTGTTGAACTTGATGCCGTTGTGA 777 0.4813 MNPPLEAFLIGLLAGVIVLAMVFAAVVYAYRRKKETSQPQLRTRRLQNLELSAISVHQNWSFHPHVLISMDEIAKATNNFSPDLIVGAGSFSLVYKAQLSTGRVVAVKKLSKGAFHGFRNFQAEVKSLDFGLARMISPLDSHVSSQFTGSSDYMAPEYRDGQTVATVKMDVYSFGVLMLETAVSGRPNGEKGFVTEVINMVAQNREMDMVDFNISRDGRISEASIKEYFRIACMCCSELQRERPEMAVIVELLNLMPL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1303 258 Gene3D Transferase(Phosphotransferase) domain 1 127 255 - -
Glsi01g1303 258 Pfam Protein kinase domain 122 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g1303 258 SMART tyrkin_6 80 253 IPR020635 GO:0004713|GO:0006468
Glsi01g1303 258 ProSiteProfiles Protein kinase domain profile. 1 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g1303 258 SUPERFAMILY Protein kinase-like (PK-like) 68 255 IPR011009 -
Glsi01g1303 258 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 129 254 - -
Glsi01g1303 258 ProSitePatterns Protein kinases ATP-binding region signature. 86 109 IPR017441 GO:0005524
Glsi01g1303 258 Gene3D Phosphorylase Kinase; domain 1 36 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1303 Glsi-ChrGlsi01 66957540 66958610 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1303 120 253 Receptor kinase-like Gene Family AT1G69990 35.915 5.46e-17 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Glsi01g1303 Pkinase 6.5e-11 CL0016