Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1302 ATGGGCCAACTGTCAAAAGCTGTTATTGCTCACTGTGCTATTATGGGTCATAACTATACCCTCTCCACTGAAAGATCCTTGTCCATAGGAGTAAAAGTTGGGAACCTTGTTAGAAGCTCGTCACCCAAGGCTGTTGTTTATGAGACTACGGCTAAAGAAGACCTCACAACCCCAGCCATGGACTCCAGTCTTGCAGAACCTGGAGCTCTCTGCCATCTGTATTTTGGGCTTGCAAAGATGATTACCTCATCACATTCTCACGTGTCCTCCCAATCTAGGGGTTCCTGGGACCACATGGCCCCAGAGTACAGAGATGGGCTAACTCTGGCTACTGTGAAGATGGATGTATACAGTTTTGGAGTTTTGATGTTTGAAACTGCCATAGGCCGTCGGCCCAATGAGAAGGAAGGGTTTGTGACAGAAGCCATGAATATGGTGGCCCAAAATAGGGAAATGGATATGGTTGATTTCAATATTTCAAGGGAGGGAAGAATAAGTGAAGCTAGTATTAAGGAGTATTTTAGAATTGCTTGCATGTGCTGTAGTGAATTGCAGAGACAAAGGCCTGAAATGGCAGTGATTGTGGAACTGTTGAAATTGATGCCGGTATGA 612 0.451 MGQLSKAVIAHCAIMGHNYTLSTERSLSIGVKVGNLVRSSSPKAVVYETTAKEDLTTPAMDSSLAEPGALCHLYFGLAKMITSSHSHVSSQSRGSWDHMAPEYRDGLTLATVKMDVYSFGVLMFETAIGRRPNEKEGFVTEAMNMVAQNREMDMVDFNISREGRISEASIKEYFRIACMCCSELQRQRPEMAVIVELLKLMPV 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1302 203 Pfam Protein tyrosine and serine/threonine kinase 75 198 IPR001245 GO:0004672|GO:0006468
Glsi01g1302 203 Gene3D Transferase(Phosphotransferase) domain 1 5 201 - -
Glsi01g1302 203 ProSiteProfiles Protein kinase domain profile. 1 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g1302 203 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 75 199 - -
Glsi01g1302 203 SUPERFAMILY Protein kinase-like (PK-like) 75 200 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1302 Glsi-ChrGlsi01 66953469 66956774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1302 75 199 Receptor kinase-like Gene Family AT2G35620 35.606 2.65e-16 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Glsi01g1302 PK_Tyr_Ser-Thr 1.4e-09 CL0016