Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1300 ATGGCAGGTGGACCTTTGAACTGCTTGCTTTTGGTTTCTTGCCTTCTATTGGCTTCCCAGTTTTGTGCCATTAAGGCACAAACTAGTCCTCCCATAGTGAAGGGATTATCATTTAGTTTCTACCAATCCAGTTGCCCCAGTCTTGAATCCATAGTCACAGACCATCTGAAGAAGGTGTTCAAGAAGGACGTTGGCCAAGCTGCTGGCTTGCTTCGTGTTTTCTTCCATGATTGCTTTGTTCAGGGATGTGATGGATCCATTTTGTTGGACCCAATACCACCAAGCAATCAAAGTGAGAGAAGCACAAGATCTAACGTAGGCATTAGGCCGGAGGCGTTGAAAACTATTGACGATATTAGGGCTCTCGTGCATAAGAAATGTGGAAAAGTTGTCTCCTGCGCTGACATTGTCGCTCTCGCTGGACGTGATGCTGTCGTCTTGTCAGGGGGCCCCAACTACTCAGTGCCACTAGGAAGACGAGACAGCCTAACCCTGAACATAAACGAAACCAATAACCTCCCGTCACCGCGCGCCACCACCAATGGCACCCTTGCCACCTTTGCCGCCCAAAATTTCGACACCACTGATGTCGTTGCCTTCTCCGGCGCCCACACCTTCGGCCGGTCCCACTGCGGTTCCTTCTTCGACCGCGTCGACGGTTCGAGTCCGGCGCCCATCAACCAATCCTTAGCCCAGAATCTCAAGGCCACCTGCCCATCCGCAGCTTCCACCAACACCTCGGTTCTGGATATCAGAACCCCAAACACGTTCGACAACAAGTACTACATCGACCTCTTGAACCGACAGGGCCTGTTCACCTCGGACCAGGACTTATTTTCGGACAGTAGGACCAAAGGGTTGGTTCAGAGCTTTGCCTTGAACCAGACCCTGTTCTTCGAGAAGTTTGTGAATGCTGTGATCAAGATGAGCCAGCTTAGGGTGCTTACGGGGACTCAAGGGCAGATTCGCGCTAAGTGCAATCTGGTCAACAGTGGCAAGAAGTCTTTCTTGGCTTCTGTGGTGGAAGAGGCGGTGGACGTGACCGAACAGTTCTAA 1056 0.5142 MAGGPLNCLLLVSCLLLASQFCAIKAQTSPPIVKGLSFSFYQSSCPSLESIVTDHLKKVFKKDVGQAAGLLRVFFHDCFVQGCDGSILLDPIPPSNQSERSTRSNVGIRPEALKTIDDIRALVHKKCGKVVSCADIVALAGRDAVVLSGGPNYSVPLGRRDSLTLNINETNNLPSPRATTNGTLATFAAQNFDTTDVVAFSGAHTFGRSHCGSFFDRVDGSSPAPINQSLAQNLKATCPSAASTNTSVLDIRTPNTFDNKYYIDLLNRQGLFTSDQDLFSDSRTKGLVQSFALNQTLFFEKFVNAVIKMSQLRVLTGTQGQIRAKCNLVNSGKKSFLASVVEEAVDVTEQF 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1300 351 SUPERFAMILY Heme-dependent peroxidases 35 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi01g1300 351 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g1300 351 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g1300 351 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g1300 351 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g1300 351 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g1300 351 PANTHER - 12 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1300 351 FunFam Peroxidase 174 309 - -
Glsi01g1300 351 CDD secretory_peroxidase 35 329 IPR033905 GO:0004601|GO:0042744
Glsi01g1300 351 ProSitePatterns Peroxidases active site signature. 67 78 IPR019794 GO:0004601
Glsi01g1300 351 ProSiteProfiles Plant heme peroxidase family profile. 35 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g1300 351 Pfam Peroxidase 53 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g1300 351 Gene3D Peroxidase, domain 2 175 310 - -
Glsi01g1300 351 FunFam Peroxidase 39 185 - -
Glsi01g1300 351 Gene3D - 40 327 - -
Glsi01g1300 351 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1300 351 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1300 351 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1300 351 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1300 351 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1300 351 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1300 351 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1300 351 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1300 351 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1300 Glsi-ChrGlsi01 66928051 66930030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1300 23 346 Peroxidase AT1G71695 55.828 1.05e-127 368