Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1296 ATGGCAAGGCAGCGACTTGGTGTTCACCACGTGGTCTTTCGCTTGTATAAAGAAGATTCTTCGTACTCATTACTTCAGAAAGACGGTGAAGGCCAAAACCATGTCATTAAGTCTTCGCAGAAGAGAGAGATACAGGAAAAAAATATCATGGCTTCTGCTGCTACTCTAAGCGCTTCTCTCATCCTTCTCTTCTCTTCCCTTCTCTTGGCTTCCCAAATCTATGCCCGTGAAACACAAGCCTGGCCTCCTATAGTGGAGGGACTCTCATGGACTTTCTATGCCAAAAGCTGTCCTGAGGTTGAATCCATCATAAGAACTGAGCTTGAGAAGATCTTCGAGAAGGACATTGGCCAAGCTGCTGGCTTGCTTCGCCTTCATTTCCATGATTGCTTTGTTCAGGGTTGCGATGGGTCTATACTGCTGGATGGAACAGCGAGTAATCCAAGCGAGAAGGCCGCGCCTCCGAACTTGAGCTTGAGGGCTCAAGCTTTCAAGATCATCGACGACCTTCGGGCCCGGGTCCAGGAGCGCTGTGGAAGAGTCGTCTCTTGTGCTGACATTACTGCCCTTGCTGCTCGTGATGCTGTTTTCTTGTCCGGAGGACCAAACTATTGCATTCCTTTGGGAAGGCGAGATGGGCTAACCTTCGCCTCAACACAAGTAGTACTAGACAATCTTCCATCACCAACCAGCAACGCCAGCACAATCCTAAAATCCCTCGCCACCAAAAACCTCAACCCCACCGACGTCGTAGCCCTGTCCGGCGGCCACACCATCGGAATCGGCCACTGCAGCTCCTTCGACAACCGCCTCTACCCCACCCAAGACCCCGTCATGGACAAGACTTTCGCCGCAAACCTCCGCCGCACCTGCCCCACCAACACCACCGTCAACACCACCGTGCTGGACATCCGGAGCCCCAAGAAGTTCGACAACAAGTACTATGTTGACCTCTTGAACCGCCAGGGCCTCTTCACCTCCGACCAGGACTTGTACACCGATAAGAGGACCAAGGGGATCGTCACCAGCTTCGCTCTGGACCAGAACCTCTTCTTTAAGAGTTTCGTGGAGGGCATGCTCAAGATGGGTCAGCTCAGCGTCTTGACCGGAAACCAAGGGGAGATTCGGGCTAATTGCTCTGTGCCGAATACGGGGTCTTTGTTGGGCACTGTGGTGGAAGATGTGGTGGAAGGTTGGTTAGAAATGTAA 1209 0.5236 MARQRLGVHHVVFRLYKEDSSYSLLQKDGEGQNHVIKSSQKREIQEKNIMASAATLSASLILLFSSLLLASQIYARETQAWPPIVEGLSWTFYAKSCPEVESIIRTELEKIFEKDIGQAAGLLRLHFHDCFVQGCDGSILLDGTASNPSEKAAPPNLSLRAQAFKIIDDLRARVQERCGRVVSCADITALAARDAVFLSGGPNYCIPLGRRDGLTFASTQVVLDNLPSPTSNASTILKSLATKNLNPTDVVALSGGHTIGIGHCSSFDNRLYPTQDPVMDKTFAANLRRTCPTNTTVNTTVLDIRSPKKFDNKYYVDLLNRQGLFTSDQDLYTDKRTKGIVTSFALDQNLFFKSFVEGMLKMGQLSVLTGNQGEIRANCSVPNTGSLLGTVVEDVVEGWLEM 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1296 402 Pfam Peroxidase 105 345 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g1296 402 ProSitePatterns Peroxidases proximal heme-ligand signature. 249 259 IPR019793 -
Glsi01g1296 402 FunFam Peroxidase 91 239 - -
Glsi01g1296 402 CDD secretory_peroxidase 87 381 IPR033905 GO:0004601|GO:0042744
Glsi01g1296 402 Gene3D - 91 380 - -
Glsi01g1296 402 PANTHER PEROXIDASE 25-RELATED 65 376 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1296 402 PRINTS Haem peroxidase superfamily signature 182 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g1296 402 PRINTS Haem peroxidase superfamily signature 303 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g1296 402 PRINTS Haem peroxidase superfamily signature 119 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g1296 402 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g1296 402 PRINTS Haem peroxidase superfamily signature 200 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g1296 402 PRINTS Plant peroxidase signature 181 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1296 402 PRINTS Plant peroxidase signature 317 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1296 402 PRINTS Plant peroxidase signature 121 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1296 402 PRINTS Plant peroxidase signature 301 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1296 402 PRINTS Plant peroxidase signature 200 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1296 402 PRINTS Plant peroxidase signature 97 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1296 402 PRINTS Plant peroxidase signature 162 175 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1296 402 PRINTS Plant peroxidase signature 248 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1296 402 PRINTS Plant peroxidase signature 357 370 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1296 402 Gene3D Peroxidase, domain 2 228 363 - -
Glsi01g1296 402 Coils Coil 401 402 - -
Glsi01g1296 402 ProSitePatterns Peroxidases active site signature. 119 130 IPR019794 GO:0004601
Glsi01g1296 402 SUPERFAMILY Heme-dependent peroxidases 82 383 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi01g1296 402 FunFam Peroxidase 227 362 - -
Glsi01g1296 402 ProSiteProfiles Plant heme peroxidase family profile. 87 383 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1296 Glsi-ChrGlsi01 66793205 66796233 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1296 62 402 Peroxidase AT1G71695 61.584 6.55e-160 452