Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1295 ATGTGCTTTTCTCATCCTTCTCTTCTCTTCTCTTCTCTTCTCTTGGCTTCCCAAATCTATGCCTGTGAAACACAAGCCAAGACTCTTATAGTGGAGGGACTCTCATGGACTTTCTATGCCAAAAGCTGTCCTGAGGTTGAATCCATCATAAGAACTGAGCTTGAGAAGATCTTCGAGAAGGACATTGTCCAAGCAGCTGGCTTGCTTCGCCTTCATTTCCATGATTGCTTCGTTCAGGGTTGCGATGGGTCTATACTGCTGGATGGAACAGCGAGTAATCCAAGCGAGAAGGCCGCGCCTCCGAACTTGAGCTTGAGTGCTCAAGCTTTCAAGATCATTGGCGACCTTCAGGCCCGGGTCCAGGAGCGCTGTGGAAGAGTCGTCTCTTGTGCTGACATTACTGCCCTTGCTGCTCGTGATGCTGTTTTCTTGTCTGGAGGACCAAACTATTGCATTCCCTTGGGAAGGCGAGATTCGCTAACCTTCGCCTCAAGACAAGTAGTACTAGACAATATTCCATCACCAACCAGCAACGCCAGCACAATCCTAAGCTCCTTCGCCACCAAAAACCTCAACCTCACTGACACCGTAGCCCTGTCCGGCGCCCACACCATCGGAATCGGCCACTGCACCTCCTTCACCAACCGCCTCTACCCCACCCAAGACCCCGACATGGACAAGACCTTCGCCGCAAACCTCCGTCGCACCTGCCCCACCAACACCACCGACAACACCACCGTTCTGGACATCCGGAGCCCCAACAAGTTCGACAACAAGTACTATGTTGACCTCTTGAACCGCGAGGGCCTCTTCACCTCCGACCAGGACTTGTACACCGATAAGAGGACCAAGGGATTCGTTACCAGCTTTGCTCTGGACCAGAACCTCTTCTTTAAGAGGTTCGTGGAGGGCATACTCAAGATGGGTCAACTCAGCGTCTTGACCGGAAACCAAGGGGAGATTCGGGCTAATTGCTCTGTGCCGAATAAGAGGTCTTTGTTTGGCACTGCGGTGGAAGATGTGGTGGAAGGTTGGTTAGAAATGTAA 1047 0.5196 MCFSHPSLLFSSLLLASQIYACETQAKTLIVEGLSWTFYAKSCPEVESIIRTELEKIFEKDIVQAAGLLRLHFHDCFVQGCDGSILLDGTASNPSEKAAPPNLSLSAQAFKIIGDLQARVQERCGRVVSCADITALAARDAVFLSGGPNYCIPLGRRDSLTFASRQVVLDNIPSPTSNASTILSSFATKNLNLTDTVALSGAHTIGIGHCTSFTNRLYPTQDPDMDKTFAANLRRTCPTNTTDNTTVLDIRSPNKFDNKYYVDLLNREGLFTSDQDLYTDKRTKGFVTSFALDQNLFFKRFVEGILKMGQLSVLTGNQGEIRANCSVPNKRSLFGTAVEDVVEGWLEM 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1295 348 Gene3D - 37 326 - -
Glsi01g1295 348 FunFam Peroxidase 173 308 - -
Glsi01g1295 348 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Glsi01g1295 348 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Glsi01g1295 348 FunFam Peroxidase 37 185 - -
Glsi01g1295 348 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1295 348 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1295 348 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1295 348 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1295 348 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1295 348 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1295 348 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1295 348 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1295 348 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1295 348 SUPERFAMILY Heme-dependent peroxidases 30 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi01g1295 348 PANTHER - 25 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g1295 348 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g1295 348 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g1295 348 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g1295 348 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g1295 348 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g1295 348 Pfam Peroxidase 51 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g1295 348 ProSiteProfiles Plant heme peroxidase family profile. 33 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g1295 348 Gene3D Peroxidase, domain 2 174 309 - -
Glsi01g1295 348 CDD secretory_peroxidase 33 327 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1295 Glsi-ChrGlsi01 66786260 66789246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1295 7 348 Peroxidase AT1G71695 59.649 5.61e-155 437