Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1273 ATGGCGTTGCACTCCCACGTAGAGCGAATCCTTTGGACTGAGGACCAAATCTCCCGCCGAGTCTCCGAACTTGCCTCGTTAATCTCCAACGACTTTCGCTCTGCTTCTCCGCCGCCCGTCGTTGTCGGCGTCGCCACTGGTGCGTTTCTATTCTTGGCCGATTTGGTTCGCAAAATCGACCTCCCCATCCCCGTTGATTTTGTCCGTGTCGAATCCTACGGTTCAGGAACCGAGTCCAATGGCGCGCCCACCATTTCCTTCGATTTGAAGGTTGACGTCAAGGACCACCACGTGATTGTGGTTGAAGACATTGTAGATACAGGACATACTTTATCTAGTGTAATTGCACACTTGAAATCCAAAGGAGCATCCTCTGTTTCTGTTTGCACTTTCCTTGATAAACCAGCAAGGAGAAAGGTTAATTTTCAGCTAGTGGGAAAGGGGAAGTTCTACCGAGGATTTGAGTGCCCAGATAATTTTGTTGTTGGTTATGGAATGGACTTCGCAGAATTGTATAGAAACTTGCCTTATGTCGGTGTCTTGAAGCCTGAACATTTCAAATGA 564 0.4787 MALHSHVERILWTEDQISRRVSELASLISNDFRSASPPPVVVGVATGAFLFLADLVRKIDLPIPVDFVRVESYGSGTESNGAPTISFDLKVDVKDHHVIVVEDIVDTGHTLSSVIAHLKSKGASSVSVCTFLDKPARRKVNFQLVGKGKFYRGFECPDNFVVGYGMDFAELYRNLPYVGVLKPEHFK 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1273 187 CDD PRTases_typeI 21 147 IPR000836 -
Glsi01g1273 187 NCBIfam hypoxanthine phosphoribosyltransferase 10 182 IPR005904 GO:0004422|GO:0006166
Glsi01g1273 187 FunFam Hypoxanthine phosphoribosyltransferase 2 187 - -
Glsi01g1273 187 PANTHER HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE 4 184 - -
Glsi01g1273 187 SUPERFAMILY PRTase-like 3 186 IPR029057 -
Glsi01g1273 187 Gene3D - 1 187 IPR029057 -
Glsi01g1273 187 Pfam Phosphoribosyl transferase domain 19 168 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1273 Glsi-ChrGlsi01 66163531 66166263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1273 1 186 PRT Gene Family AT1G71750 62.437 2.80e-88 256