Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1267 ATGGATATCAGTAATGGTTCTGTATCAAGCGAGCATCACAAGCTTCATGAATCGGTTTCAAAATGTGCAGATCCATTATCTGTTTCTCCATTGCAAACTTCTCCAAAGTCACCAAGATCCCCTAATTCTCCAAATTCACCGAGATCCCCTAATTCTCCAAAGTCCCCAAGGGCGCATGGCAAGTACAATAAGCAAAGTCCAAAGAACGATAAGCAACCACATTCTCCAAAAGATGGAACTCTCAATAAAGTATATGATTACTTCTTGCCTTGCAAGCTTAATCGATCTACTTTAGAAAGTGCAGATTCGTTCTCCGTTTCTCCTTTGCAAATTTCTCCGAAATCACCAAGATCTCCAAATTCTCCAAGGTCGCCTAGCTCTCCAAGGTCCCCAAGGGGGCATGACATGCTCAGCAAGCATAGTCCAAAGATTAATGATAGGCAATCACGTTCACCAAGAGATGGAAGACCAAAGAAAGGAGGTTGTGGGGGTAAAGGCACCTGGGGAGGATTGCTTGATACCGATGACATGAACTTTCTTGACCCTAACGACCCAAACTATGATAGCTGCGAGGAACATGAACATTCAAATGAAAGGCAAAAGAAAGGGGATTTGGAGGAGTACAAGAAGAAAGCTACAATAATAGTGGAGGAATATTTTGCCACTGATGATGTTGTTGTAACAATGAATGAACTGAAAGAACTTGGAGCACCACAGTTCAACTACTATTTTGTCAAGAAGCTTGTCTCTATGTCAATGGACAGACATGACAAAGAAAAAGAAATGGCTGCTGTTCTGTTATCTGCACTTTATGCTGACACAATTGATCCTTTACAAGTTTACAAAGGCTTCAGTAAATTAGTTGAATCTGCAGATGATTTGATTGTGGATATACCAGACACTGTTGATGTTCTAGCTCTTTTCCTAGCTCGAGCAGTGGTTGACGACATACTCCCTCCTGCATTTCTGAAAAAACAGATGGCTCACCTGTCGAAGGATTCCAAAGGGGTTGAAGTCTTGAAAAAAGCTGAAAAAAGTTATCTTGCAGCCCCTCTGCATGCAGAAATCATAGAGCGCCGCTGGGGAGGTAGTAAGAATATGACAGTTGATGATGTGAAGGCTAGGATAAACAATTTGTTGAAAGAATATGTAGTAAGTGGTGACAAGAAAGAAGCTTTTAGATGCATTAAGGATTTGAAAGTTCCCTTTTTCCATCACGAAATAGTGAAACGGGCTCTTATAATGGCAATGGAGAGGCGCCAAGCAGAAGGTCCCCTGCTAGATCTGTTGAAGGAAGCAGCCGAAGAAGGTTTCATAAACTCAAGCCAAATGTCAAAAGGCTTTGATCGGTTGATTGACACTGTCGATGACTTATCCCTTGACATACCAAATGCACGCGGAATACTGAAACAGTTAATGTCCAAGGCAGCATCTGAGGGTTGGTTATGTATCTCCTCTTTGAAATCACTCTCACTGGAGCCAGAAAAAAAGTCATTAGAAGAAAGTGCTGCAAGAAATTTCAAGATAAGGGCTCAGTCCATGATTCAAGAGTACTTCTTGTCTGGTGATATATGGGAAATTATTAGTTTTCTAGAACAAGAGAATAGCAATTGTTGTGCTCAACTGAATGCAATCTTTGTTAAGAAACTGATAACTCTAGCCATGGACAGGAAGAATAGGGAGAAGGAAATGGCTTCTGTTTTGCTTTCATCTTTGTGTTTCCCGGACGACGATGTAGTAAATGGTTTTGTTATGTTGATAGAATCAGCAGATGACACTGCTCTTGATAACCCAGTTGTGGTTGAGGATCTTGCTATGTTTCTAGCTAGAGCAGTAGTGGATGAAGTCCTTGCCCCGCAACATCTAGAAGAGATTGGAACACAGTGTCTGGGACCAGATTCAATAGGAAGCAAAGTGCTTCGAATGGTGAAGTCATTGCTGAAGGCTCGCCTTTCTGGGGAGCGTATATTGAGGTGTTGGGGTGCTGGGGGAAGCAGCAGAACCGGATGGGAAGTTGAGGATGTCAAGGACAAGATTGTGAAGCTGCTAGAGGAGTATGAGTCTGGAGGTGGGATAAGGGAAGCTTGTCGATGCATGAAGGAGTTGGGAATGCCATTCTTCCACCATGAGGTTGTCAAGAAAGCTCTGGTGGCGATCATCGAAAAGAAGAACGAGAGGCTGTGGGGTCTGCTCAAGGAGTGTTTTGAATCTGGACTAATAACTATGAATCAGATGGTGAAGGGCTTTGGAAGGGTAGCTGAATCTCTTGATGACTTGGCTTTGGATGTTCCTGACGCTAAGAATCAGTTCAAACACTATGTTGAAAAAGCAAAGATTTCGGGATGGTTAGATTCTTCATTTTGTTTCAGCAATTTGGAACATTCAACAGAGAATGGAACCTGCTAA 2406 0.4239 MDISNGSVSSEHHKLHESVSKCADPLSVSPLQTSPKSPRSPNSPNSPRSPNSPKSPRAHGKYNKQSPKNDKQPHSPKDGTLNKVYDYFLPCKLNRSTLESADSFSVSPLQISPKSPRSPNSPRSPSSPRSPRGHDMLSKHSPKINDRQSRSPRDGRPKKGGCGGKGTWGGLLDTDDMNFLDPNDPNYDSCEEHEHSNERQKKGDLEEYKKKATIIVEEYFATDDVVVTMNELKELGAPQFNYYFVKKLVSMSMDRHDKEKEMAAVLLSALYADTIDPLQVYKGFSKLVESADDLIVDIPDTVDVLALFLARAVVDDILPPAFLKKQMAHLSKDSKGVEVLKKAEKSYLAAPLHAEIIERRWGGSKNMTVDDVKARINNLLKEYVVSGDKKEAFRCIKDLKVPFFHHEIVKRALIMAMERRQAEGPLLDLLKEAAEEGFINSSQMSKGFDRLIDTVDDLSLDIPNARGILKQLMSKAASEGWLCISSLKSLSLEPEKKSLEESAARNFKIRAQSMIQEYFLSGDIWEIISFLEQENSNCCAQLNAIFVKKLITLAMDRKNREKEMASVLLSSLCFPDDDVVNGFVMLIESADDTALDNPVVVEDLAMFLARAVVDEVLAPQHLEEIGTQCLGPDSIGSKVLRMVKSLLKARLSGERILRCWGAGGSSRTGWEVEDVKDKIVKLLEEYESGGGIREACRCMKELGMPFFHHEVVKKALVAIIEKKNERLWGLLKECFESGLITMNQMVKGFGRVAESLDDLALDVPDAKNQFKHYVEKAKISGWLDSSFCFSNLEHSTENGTC 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1267 801 Gene3D - 358 489 - -
Glsi01g1267 801 Gene3D - 658 790 - -
Glsi01g1267 801 SMART ma3_7 507 618 IPR003891 -
Glsi01g1267 801 SMART ma3_7 675 784 IPR003891 -
Glsi01g1267 801 SMART ma3_7 208 319 IPR003891 -
Glsi01g1267 801 SMART ma3_7 372 483 IPR003891 -
Glsi01g1267 801 MobiDBLite consensus disorder prediction 25 39 - -
Glsi01g1267 801 ProSiteProfiles MI domain profile. 674 793 IPR003891 -
Glsi01g1267 801 Gene3D - 195 348 - -
Glsi01g1267 801 Gene3D - 494 650 - -
Glsi01g1267 801 SUPERFAMILY ARM repeat 367 488 IPR016024 -
Glsi01g1267 801 MobiDBLite consensus disorder prediction 133 160 - -
Glsi01g1267 801 ProSiteProfiles MI domain profile. 506 627 IPR003891 -
Glsi01g1267 801 PANTHER PROGRAMMED CELL DEATH 4 108 787 IPR039778 GO:0045892
Glsi01g1267 801 Pfam MA3 domain 209 319 IPR003891 -
Glsi01g1267 801 Pfam MA3 domain 373 482 IPR003891 -
Glsi01g1267 801 Pfam MA3 domain 676 784 IPR003891 -
Glsi01g1267 801 Pfam MA3 domain 511 617 IPR003891 -
Glsi01g1267 801 MobiDBLite consensus disorder prediction 63 77 - -
Glsi01g1267 801 MobiDBLite consensus disorder prediction 99 204 - -
Glsi01g1267 801 FunFam programmed cell death protein 4 197 350 - -
Glsi01g1267 801 SUPERFAMILY ARM repeat 204 365 IPR016024 -
Glsi01g1267 801 MobiDBLite consensus disorder prediction 1 82 - -
Glsi01g1267 801 ProSiteProfiles MI domain profile. 207 328 IPR003891 -
Glsi01g1267 801 MobiDBLite consensus disorder prediction 99 117 - -
Glsi01g1267 801 SUPERFAMILY ARM repeat 504 664 IPR016024 -
Glsi01g1267 801 ProSiteProfiles MI domain profile. 371 492 IPR003891 -
Glsi01g1267 801 MobiDBLite consensus disorder prediction 186 204 - -
Glsi01g1267 801 SUPERFAMILY ARM repeat 670 790 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1267 Glsi-ChrGlsi01 66082803 66086927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1267 673 784 Eukaryotic Initiation Factors Gene Family AT5G57870 33.043 2.97e-10 62.0