Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1264 ATGACTGTGGAGTCGGCATCTTCTGAGTGTTTCGGGAAAGTGATGGCTTCGATGCCGGGGTTTCGCTTCCACCCTACGGATGAGGAACTGGTTATGTACTATCTGAAGAGGAAAATGTGTAGTAGGAAGCTGAAGCTCGATGTAATTCGGGAGATTGACGTCTACAAGTGGGACCCTGAGGAATTGCCTGGGCAATCTGTGCTGAAAACTGGAGATAGGCAATGGTTTTTCTTTAGTCCTAGAGATAGGAAGTACCCTAATGCTGCAAGGTCTAATAGAGCAACAAGACATGGGTATTGGAAAGCCACAGGAAAGGATCGTAATGTGATGTGGAATTTTCGGGCAGTTGGAGTGAAAAAGACATTGGTTTTTTATAAAGGCAGAGCACCTAATGGTGAGCGGACTGATTGGGTTATGCATGAATACACCATGGATGAAAAAGAGCTTGAAAGATGCCAGAGTTTTAAGGACTATTATGCACTTTACAAGCTTTTCAAGAAAAGCGGCCCTGGTCCTAAAAATGGTGAACAGTATGGTGCACCGTTTAAAGAAGAAGAGTGGACAGATGATGATTTTGTAGATTTTAATATTAACTCAGCTGACTGTGAGGTTCCAACTCAGCAACTTGATGAGGTTATTTCTGTTGATACTGTCACTGTTAATGGTCTGGTGCAGCCTTTGCTTGATGATGAAATTGAGGAAATCATGAAAACAATTATCGATGAAGAGCTTGTCGGGGATCAGCTACATTTGAATGGTTATTCTGCCTCACCTCTGGTTGTTGCTGAAGAAACACAGAGTGCTGTGGTGGATGAATTCTGTGGGGAAGTCACGTTCCCTGAGCCAAACAAAATATTTCACCCAAGCAGTGAGCAATGTGATCAGGAGCCCAGTTATGACTTCCCTCAGTCAGCTACTTCTCACTTGCATGTGTCTGAAGCTCCTGAGGTCACTTCTGTTTCCAACTTTCAAGGAGAGGAGCATTGCTTTCGTGAGGATGACTTCTTGGAAATTGATGATCTCATTGGTCCTGAAACTGTATTGTCAAACATAGATAAGCCTCTAGAGAACCTGCAGTTTGAAGATGGATTAAGTGAACTTGATCTCTACCATGATGCTCAGATGTTTCTTCGTGACTTGGGGCCAATCAATCAGGAAACTGTTTCACATCCATATATGAATAGCCTGGATACTAGTATTGCAAATCAAAATAATGAGTTGCTATCCAATCAAGAGGCTGCAAATCAAACTGGTGGTGAACAATGGATGCATGGTCAAGGAAACATCCTGAGTCCCGCAGAACACATTGATGGTTCTTTCTCTCTACCAACATCAGGTGTAGTATGTGAATCTTCCAACTTTCGTACTGAAAGCAATGAACCTCAAGGTAGCTCTGTGGGAGGTGTTGCTGCAGGTAGATTCTCCTCTTCTCTCTGGGCCTTTGTCGAGTCGATACCTACCACTCCTGCATCAGCTTCTGAAAATGCTTTGGTGAATCGGGCCTTTGAGCGAATGTCCAGCTTCAATAGGTTGAGGATTGGTATCAAGAACACAACCGGTGCTGCAGGTAATGACACTGCAACTATGAAGAGAGTAGGCAGAAAGGGATTTTTCTTCCTTTTCTTATCGGTTCTTGTTGCCTTGTGCGCTTTCTTGTGGGTTTCTATGGGAACTTTAAGATTATTAGGGAGATGCATCCCTTGA 1704 0.4349 MTVESASSECFGKVMASMPGFRFHPTDEELVMYYLKRKMCSRKLKLDVIREIDVYKWDPEELPGQSVLKTGDRQWFFFSPRDRKYPNAARSNRATRHGYWKATGKDRNVMWNFRAVGVKKTLVFYKGRAPNGERTDWVMHEYTMDEKELERCQSFKDYYALYKLFKKSGPGPKNGEQYGAPFKEEEWTDDDFVDFNINSADCEVPTQQLDEVISVDTVTVNGLVQPLLDDEIEEIMKTIIDEELVGDQLHLNGYSASPLVVAEETQSAVVDEFCGEVTFPEPNKIFHPSSEQCDQEPSYDFPQSATSHLHVSEAPEVTSVSNFQGEEHCFREDDFLEIDDLIGPETVLSNIDKPLENLQFEDGLSELDLYHDAQMFLRDLGPINQETVSHPYMNSLDTSIANQNNELLSNQEAANQTGGEQWMHGQGNILSPAEHIDGSFSLPTSGVVCESSNFRTESNEPQGSSVGGVAAGRFSSSLWAFVESIPTTPASASENALVNRAFERMSSFNRLRIGIKNTTGAAGNDTATMKRVGRKGFFFLFLSVLVALCAFLWVSMGTLRLLGRCIP 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1264 567 FunFam Nac domain-containing protein 86 26 170 - -
Glsi01g1264 567 SUPERFAMILY NAC domain 14 167 IPR036093 GO:0003677|GO:0006355
Glsi01g1264 567 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 290 - -
Glsi01g1264 567 ProSiteProfiles NAC domain profile. 17 167 IPR003441 GO:0003677|GO:0006355
Glsi01g1264 567 Gene3D NAC domain 26 169 IPR036093 GO:0003677|GO:0006355
Glsi01g1264 567 Pfam No apical meristem (NAM) protein 19 143 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1264 Glsi-ChrGlsi01 66044508 66047990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1264 3 566 NAC Transcription Factor Family AT1G34190 44.407 1.26e-147 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi01g1264 NAM 7.1e-36 No_clan