Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1258 ATGGCCGAAACCCCCATCCGATTCGGTATCCTCGGCTGCGACCAGATTGCCTGCAAGCTTTGCCGGGCCATAACTATCGCTCCCAACGCCACCCTCTGCGCCGTCGCTAGCCACTCCCTTGAAAATGCTTGCAAATTCGCCTTCGCTAATGACTTCCCCTCCGGCTCCAAGGCTTACAACTCCTACGAAGCCCTCCTTGATGACCCGTACGTCGACGCCGTCTACGTCCCACTTCCCACCAGCTTGCACGTGCCCTGGGCCGTGCTCATAGCTCAGAAGAAGAAACATCTGCTACTGGAGAAGCCAGTAGCTCTCAACGCCGATGAGTTCGATAAGATTATCGAGGCCTGTGAATCCAATGGGGTGCAGCTTATGGACAGTACTATGTGGATCCATCATCCCAGGACCGCTAAAATGGCGGAGTCCTTATCCAATGCGCAGCATTTTGGCCAACTGAAATCGGTACGGAAATTGAACCGGAACTCTATACACACCGTTTTTACATTTTTTGTTGATCCTGATTCTCTTAAGAATGACATTCGTGGGAAGCCGGATTTTGATGCTCTTGGTGTTGAAGGCTGGTATTGTGTTGGGGCAATTCTGTGGGCTGCCAACTATGAATTACCTAAAACAGTAATAGCCTCGCGAGAACCTGTGCTTAATGAAGGTAGGGTGATATTGTCTTGCGGGGCTTCTCTACACTGGGAAGATGGGAAAGTAGCAACCTTCCATTGCTCTTTCTTATCAAATTTGACAATGGATATAACAGTTGTTGGGACAAAAGGAACATTACATGTAAATGACTTTATTATTCCTTATCAAGAGACGATGGCATCATTTACTGAAGGTTCAGGAGGTTTTGATAAACTTGTGACAAGGTGGGCTTCACATCCAAGAGAGGTTACAATGATTATGGATCTCCCTCAGGAGGCTTATATGGTGAGAGAATTCGCCCGGGCAAAGAGGAAGGATAGGCATCTGAACCCGGAATTGTTTATTCTGAATGACAATGAGAGCGAGAAAGCTAGCTCTATTTCTGATATGAATGCACAGAGACCTACCTGTTCTTCAACTTTGAAAGACTCGAAGTTTCCTCCATACCTTATGCTTAACCATGGGGCCACAGAGTTAGAGAGAACTTCAGCCACGAAGGTTTGCCCATATACTTATTGCTCTCTCAATGGTCATCGTCATGTTTTTGTGCTGCCATTGAAGAGCTTCTTGTCGGTAAGGAGACAAATTTTGAAGGCCCAGAAGAGTATGAAGCTGAAAGCTCTAAGCCCTCGAAGATTGAAAGGTTCCCAATCAAAGGACTCTGATATTGGCATGGATCTCTTCACTGAAGTTTATGCTAAGAAAAATGAAGATGAAGACGAAGTGGGAAATCTGGATTCTTTCAAAGAGATTGAGGGGGATGAAGAAGATATCAAGCAAGTTATTGCAAGCGTTTCTGATGGGTCCCCAATTTCTGATGTTGATTTTGAGTAG 1488 0.459 MAETPIRFGILGCDQIACKLCRAITIAPNATLCAVASHSLENACKFAFANDFPSGSKAYNSYEALLDDPYVDAVYVPLPTSLHVPWAVLIAQKKKHLLLEKPVALNADEFDKIIEACESNGVQLMDSTMWIHHPRTAKMAESLSNAQHFGQLKSVRKLNRNSIHTVFTFFVDPDSLKNDIRGKPDFDALGVEGWYCVGAILWAANYELPKTVIASREPVLNEGRVILSCGASLHWEDGKVATFHCSFLSNLTMDITVVGTKGTLHVNDFIIPYQETMASFTEGSGGFDKLVTRWASHPREVTMIMDLPQEAYMVREFARAKRKDRHLNPELFILNDNESEKASSISDMNAQRPTCSSTLKDSKFPPYLMLNHGATELERTSATKVCPYTYCSLNGHRHVFVLPLKSFLSVRRQILKAQKSMKLKALSPRRLKGSQSKDSDIGMDLFTEVYAKKNEDEDEVGNLDSFKEIEGDEEDIKQVIASVSDGSPISDVDFE 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1258 495 Pfam Oxidoreductase family, NAD-binding Rossmann fold 6 125 IPR000683 GO:0000166
Glsi01g1258 495 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 133 320 - -
Glsi01g1258 495 Gene3D - 1 132 - -
Glsi01g1258 495 PANTHER - 1 325 - -
Glsi01g1258 495 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 156 IPR036291 -
Glsi01g1258 495 Gene3D Dihydrodipicolinate Reductase; domain 2 133 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1258 Glsi-ChrGlsi01 65909931 65915633 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1258 350 493 Calmodulin-binding Proteins AT2G38800 48.980 1.56e-27 114