Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1256 ATGATAATCCTATATAATGCTTGGCTCCTCCTAATCAATGGCAAAGACCAAGAGGGAGATTCGATGGAGGTTCATATTTTGCTATTGTGCATCACGCTATCCTTAGTCATAGCCCGGCTTTTCCTGAACCGCCGTCGTTATAAAAACCGGCCACCCGGTCCAACCGGTCTCCCCATCATTGGCAATCTCCTGCAGCTCGGCCCCAAGCCCCACCAATCCTTCTCTGAATTAGCCAAAACCTATGGCTCCCTCCTCTCTCTCCGCCTCGGCTCCGTCACGGTGGTGATCGCCTCCTCCCCCGACGCCGCCAAAGAAATCCTCCAAAAGAACGACCAGTCTTTCCCCAACCGCCCCATCCTTGAGTCCGTCTCTGCCCAGCCCAACGTCAACGACACCCTCGCCTGGGCCCCCGCCGACCACAGGTGGCGCAACCGCAGACGCATCTGCAGCACCCAGATATTCACTGCCCAACGCCTTGACCTGCTCCAACACTTGCGCCACCGTAACGTCCGCCAACTGGTGGAACATATCCAGAAGCATTCAGAGGCAGGAACCCAGGTGGATATAGGCCAGCTTGCCTTCGCCACCATGCTGAACTTGGTGTCAAACACGGTATTCTCTGTGGATCTCGTGGACCCTGAATTTGAGACGGCCGGGGAGTTCAAGGAGCTTGTGTGGAGGATCATGGAGGATGCTGGGAAGCTGAACCTTGCGGACTATTTTCCGGCATTGAAGAGGTTTGATTTGCAGGGTGTGAGGCGGCACGTGAGGGTTTCTTACCTGAGGTTGCATGAGATCTTTGATGAGATTATTCACAAACGTTTGAAAGATAGGGAGAATTCAAGTGCTAGAAATGGGGATTTCTTGGACGTTTTGCTTGATCATTGCCAACAGGAAGAGGGATCGGATTTCAGTGTTGAAGGCATCAAGCCATTAATTCTGGATCTTTTCATAGCTGGAAGTGACACTTCAGGATCAACCACAGAGTGGGCAATGGCAGAGCTTGTTCGCAACCCTGAGATAATGCAGAAAGCACGAACGGAAGTGAACCAAGTGATAGGCCCAAATGGCCAAGTCAAAGAATCAGACATCCCACGGCTTCCCTACATCCAAGGAATAGTGAAAGAAACCCTAAGGCTTCACCCACCAGTGCCCCTTCTCTTGCCATACATTGCAGCAAACGACATCGTAGTGAGTGGCTATACCATCCACAAAGGGAACCAGGTTCTGATAAACGCATGGTCCATTGGGAGAAACCCTAGTTACTGGGATGATGACCCACTGTTGTTTTTTCCTGAAAGGTTTCTTGGGTCTGCCATAGATTTTAAGGGCAGGGACTTTGAGTATTTGCCCTTTGGTGCTGGCAGAAGGATTTGCCCAGGGTTGCCTCTCGCTAATAGGATGATTAGCTTGATGTTGGCCACGTTGGTACATTGTTTTGAATGGGAGCTTCCTAAAGGTATGGCGCGTGAAAGCATTGACATGAGTGAGCAGTATGGAATAACTTTGAAGAAGGCTGTTCCTCTTTGTGTTGTTCCAAAATCCGTATAA 1551 0.5055 MIILYNAWLLLINGKDQEGDSMEVHILLLCITLSLVIARLFLNRRRYKNRPPGPTGLPIIGNLLQLGPKPHQSFSELAKTYGSLLSLRLGSVTVVIASSPDAAKEILQKNDQSFPNRPILESVSAQPNVNDTLAWAPADHRWRNRRRICSTQIFTAQRLDLLQHLRHRNVRQLVEHIQKHSEAGTQVDIGQLAFATMLNLVSNTVFSVDLVDPEFETAGEFKELVWRIMEDAGKLNLADYFPALKRFDLQGVRRHVRVSYLRLHEIFDEIIHKRLKDRENSSARNGDFLDVLLDHCQQEEGSDFSVEGIKPLILDLFIAGSDTSGSTTEWAMAELVRNPEIMQKARTEVNQVIGPNGQVKESDIPRLPYIQGIVKETLRLHPPVPLLLPYIAANDIVVSGYTIHKGNQVLINAWSIGRNPSYWDDDPLLFFPERFLGSAIDFKGRDFEYLPFGAGRRICPGLPLANRMISLMLATLVHCFEWELPKGMARESIDMSEQYGITLKKAVPLCVVPKSV 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1256 516 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1256 516 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1256 516 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1256 516 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1256 516 PRINTS E-class P450 group I signature 102 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1256 516 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1256 516 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1256 516 Pfam Cytochrome P450 51 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1256 516 SUPERFAMILY Cytochrome P450 51 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1256 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Glsi01g1256 516 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1256 516 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1256 516 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1256 516 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1256 516 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 26 514 - -
Glsi01g1256 516 Gene3D Cytochrome P450 37 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1256 516 FunFam Cytochrome P450 76C4 42 512 - -
Glsi01g1256 516 CDD CYP76-like 78 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1256 Glsi-ChrGlsi01 65881233 65898266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1256 21 513 Cytochrome P450 AT2G45550 43.227 5.08e-144 422