Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1255 ATGGCGTTTCCTTCAACTTCTTTGGACACAAGCTGGTGGGTGTTCACACTTCCGGCCATAGCAGGAACCCAGAATTACTTGCTTAACAATCTGCTCTTGGTGATCTTACTGGCACTTTTCTTAATTGGGTTTCTGGCATGGACTTTCTCCTCTGGAGGTCTAGCTTGGAAAAATGGCAGGACCCAGATGGGTCGGGTCGCTATACCTGGACCCAGAGGTCTCCCTATATTCGGCAGCTTATTCAGTTTGAGCCATGGCTTGGCTCATCGTACCCTAGCTTCCTTGGCTTCCTCCTCAGCTGCCACACAGCTCATGGCCTTCAGCTTGGGCTCAACCCCAGCCGTTATTACCTCCAATCCTCGTATAGCACGCGAAATCTTGACCTCCTTACACTTCGCAAACCGTCCCACAAAGCAATCCGCTAAGAGCCTCATGTTCAGCCGCGCCATAGGGTTTGCACCCAACGGCACATACTGGCGCCTGCTCAGGAGGATTGCCTCTTCTCACCTCTTCTCGCCTAGGCGCATCGCTACTCATGAGGCTGGTCGCCAGCTCCACTGCGCTGCCATGTTGCGTGCCGTAGCCAGCGAACAATCCAAACATGATGGCGGTGTCGTTTGCCTAAGGAAACACATCCAAGCTGCTGCTCTTAACAACATCATGGGCATCGTTTTTGGCAAAAGATACGACCAAGAAATAGAAGATTGCCCCAATTATAGCTCTGAGGCTAAGGAGCTCCATGAGATCGTTAGGGAAGGGTTTGAGCTGTTGGGGGCCTTCAATTGGTGTGATTATATGCCTTGGATCAGCTTCTTTTATGACCCTTCTCAAGTACAAGAAAGGTGTTCAGCTCTTGTTCCTCGAGTTAGGGATTTTGTCAAACAGTTGATAGACAGACACCGGTTGACTCCGACGTCCAAAGATCTTTCTGATAGCTCGGACTTCGTGGATGTTTTGCTCTCCCTAGATGGTGATGAAAAGCTGCAAGAGGATGACATGATCGCCGTTTTATGGGAGATGATATTTCGAGGCACTGATACCGTGGCACTTTTAACCGAGTGGGCAATGGCGGAGCTGGTTTTGAACAAAGAAATACAGCAAAGGCTTCGTGACGAGGTTGACGAGGCAGTGGGAGACAAAGATTATGTCAGAGATGCTGACGTGGTTAAAATGCCCTATCTTCAAGCCATCGTGAAGGAGACACTGCGGGTGCACCCTCCGGGGCCCCTACTCTCGTGGGCTCGGATATCCACGTCGGATGTCCAGCTCAGCAACGGCATGGTGGTCCCGGCCAACACAACAGCGATGGTGAACATGTGGGCCATAACCCACGACCCGGAAGTGTGGGAGGAGCCGTTGGTGTTCAAGCCAGAGAGGTTTGTGAAGAGCGAGGGAGGAGCTGACGTGGACGTGAGAGGCGTTGACCTGAGGCTCGCGCCGTTTGGAGCCGGCCGTAGGGTTTGTCCAGGTAAGAACCTCGGGCTCGTGACCGTGAGCCTTTGGGTAGCTAAATTGGTTCGCCAGTTTGAGTGGATCCAGGACCAGGCTAACCCAGTTGACCTAACAGAGGTGCTCAAGCTATCTTGTGAGATGAAGAACCCCCTCAAAGCAGTCGCCATACCTAGGGTTAGGGGCTAG 1638 0.5232 MAFPSTSLDTSWWVFTLPAIAGTQNYLLNNLLLVILLALFLIGFLAWTFSSGGLAWKNGRTQMGRVAIPGPRGLPIFGSLFSLSHGLAHRTLASLASSSAATQLMAFSLGSTPAVITSNPRIAREILTSLHFANRPTKQSAKSLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRIATHEAGRQLHCAAMLRAVASEQSKHDGGVVCLRKHIQAAALNNIMGIVFGKRYDQEIEDCPNYSSEAKELHEIVREGFELLGAFNWCDYMPWISFFYDPSQVQERCSALVPRVRDFVKQLIDRHRLTPTSKDLSDSSDFVDVLLSLDGDEKLQEDDMIAVLWEMIFRGTDTVALLTEWAMAELVLNKEIQQRLRDEVDEAVGDKDYVRDADVVKMPYLQAIVKETLRVHPPGPLLSWARISTSDVQLSNGMVVPANTTAMVNMWAITHDPEVWEEPLVFKPERFVKSEGGADVDVRGVDLRLAPFGAGRRVCPGKNLGLVTVSLWVAKLVRQFEWIQDQANPVDLTEVLKLSCEMKNPLKAVAIPRVRG 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1255 545 PRINTS E-class P450 group I signature 438 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1255 545 PRINTS E-class P450 group I signature 395 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1255 545 PRINTS E-class P450 group I signature 478 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1255 545 PRINTS E-class P450 group I signature 332 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1255 545 PRINTS E-class P450 group I signature 98 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1255 545 PRINTS E-class P450 group I signature 352 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1255 545 PRINTS E-class P450 group I signature 488 511 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1255 545 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1255 545 PANTHER CYTOCHROME P450 78A7-RELATED 10 542 - -
Glsi01g1255 545 Pfam Cytochrome P450 69 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1255 545 Gene3D Cytochrome P450 56 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1255 545 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 481 490 IPR017972 GO:0005506|GO:0016705
Glsi01g1255 545 FunFam Cytochrome P450 78A5 60 542 - -
Glsi01g1255 545 CDD CYP78 102 535 - -
Glsi01g1255 545 SUPERFAMILY Cytochrome P450 68 542 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1255 545 PRINTS P450 superfamily signature 479 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1255 545 PRINTS P450 superfamily signature 343 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1255 545 PRINTS P450 superfamily signature 488 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1255 545 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1255 Glsi-ChrGlsi01 65864369 65866974 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1255 7 538 Cytochrome P450 AT5G09970 66.916 0.0 731