Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1244 ATGGCCAAGTCTCAGTCCTCTCCCACATCTTCCCTATACAAATATTCAAACTTCACAACAGGAGAATTATTCAAAGCATGGACTTCATGTTCACAGGTTTCAATTGGAGGATCATACAGGCTGATTGATGTCCCAATGAGCAATTGCATCAATAGTGGGATCAACAAAGTGTACATTCTGACTCAGTTCAACTCACAATCACTCAACAGGCACATTGCACGTGCTTACAGCTCTGGCAATGGAGTCACCTTTGGGGATGGCTATGTCGAGGATACGAGAAGTAAGGATATTGAAGATGTATTGATTCTTTCCGGGGATCACCTATATAGGATGGACTATATGGACTTTGTTAAAGCAGCTACTAGCTACCAGAGAGCAACTTGGGTGAGGGTATTGTATTGCCTGAGAGATGAGGGATTACATGTGAGTGGTGGATTTTCTTCTAGGGTCTCAAAAAGTGCATTGAGAGAAAGGTTTAAGGCCTTCAATGCTATGTTTGAGGAGGACACTGTGATGCTTGGTGCTGATTTCTATGAAACCAAGGCTGAAATGGCAGCACTATTAGCTGAGGGAAGAGTTCCAACAGGGATAGGAGAAAATACAAAGATCAAAGAGTGCATTGTTGACAAAAATGCTAGAATTGGAAGGAACGTTGTAATAGCAAACTCAGAGGGCATACAAGAGGCTGATAGATCTTTAGAAGGGTTTTATATCCGGTCTGGTGCTACCACCTCAAGTGGATATGGATCCTCTGCTGTGGTATAA 765 0.4261 MAKSQSSPTSSLYKYSNFTTGELFKAWTSCSQVSIGGSYRLIDVPMSNCINSGINKVYILTQFNSQSLNRHIARAYSSGNGVTFGDGYVEDTRSKDIEDVLILSGDHLYRMDYMDFVKAATSYQRATWVRVLYCLRDEGLHVSGGFSSRVSKSALRERFKAFNAMFEEDTVMLGADFYETKAEMAALLAEGRVPTGIGENTKIKECIVDKNARIGRNVVIANSEGIQEADRSLEGFYIRSGATTSSGYGSSAVV 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1244 254 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 31 133 IPR029044 -
Glsi01g1244 254 SUPERFAMILY Trimeric LpxA-like enzymes 169 243 IPR011004 -
Glsi01g1244 254 SUPERFAMILY Nucleotide-diphospho-sugar transferases 33 141 IPR029044 -
Glsi01g1244 254 Pfam Nucleotidyl transferase 32 127 IPR005835 GO:0009058
Glsi01g1244 254 Gene3D Hexapeptide repeat proteins 134 246 - -
Glsi01g1244 254 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 89 122 IPR011831 GO:0005978|GO:0008878
Glsi01g1244 254 Pfam Exo70 exocyst complex subunit 93 168 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1244 Glsi-ChrGlsi01 64893005 64895811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1244 57 168 EXO70 exocyst subunit family AT1G72470 45.536 6.16e-22 92.8