Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1194 ATGAGCCCCATCGCTACAGAGAGTGATCAATATGATGCTTGTCTTGATGCCATGTTGCTATCAAGTGGTCAGGTCTACCCTGCGGTGTTGAATGCTGCCATTGAGCTCAACCTGTTTGAGATTATAGCTCAGGGAAGCCCTAAGGGCATGTCACCCTCTGATATTGTTTCTAAGCTTCCAAGTAAATGTGCCAACACAGTTCACAGGCTCGATCGAGTGTTGTTCTTGCTTGCTAGTTACTCTCTGCTTACTTGTTCTAAGAAAATCCATCAAGATGGTATGGTTGAGAGGCTTTATAGGCTATCTCCCACCGGTAAATACTTGTTCATTGATGATGATGGAGCCTCCTATGCTTCAGTTTCAAAATTGCTTTGTCACCCAGCTTATATAAAAGTCTTGCAAAATTTCAAGCAAGTGATTCTTGATGATGAAGAGGACCTATTCAAGAGAGTTCATGGGATGTCTATGTTTGAATATATGGAAACAGACCCAACATTCAAACCCTTGTTTCATAGGGCAATGTCTGATATCTCAACCATGCACATGAGGCAGATTCTTGAAACATACAAAGGATTTGAAGGGATATCAACACTTGTTGATGTGGCAGGTGGCATTGGGCAAAGCCTCAAAATGATCGTCTCTAAGTACCCTTCAATAAAGGGCATTAACTATGATTTACCCCAAGTGGTACAACATGCCCTATCCCACGCAGGAATCACGCACGTTGGAGGAGATATGTTCAGAGGTGTCCCAGAAGGTGATGCTATAATCATTAAGGCTATAACCCATAATTGGAGTGATGAAAAATGTATACAAATTTTGAAGAATTGCCATCAATCCCTTAAGAAAGATGGGAAGGTTATTCTAATTGATGTCATAATGCCGGAAATACCGAAGGCAACCAACTGCGATAAGTATGTTTCGATTCTTGACAATATTATGTTTGTCCAAGCTGGTGGGAAGGAAAGAACTGAGAAAGAATTTGAAGCTCTATGCAAAGGTGCTGGGTTTTCTAGGTATCAAGTTGCTTGTCGTGTTTTCTCAGCTTTGGGAGTCATTGAGTTTTTTAAATAA 1074 0.4097 MSPIATESDQYDACLDAMLLSSGQVYPAVLNAAIELNLFEIIAQGSPKGMSPSDIVSKLPSKCANTVHRLDRVLFLLASYSLLTCSKKIHQDGMVERLYRLSPTGKYLFIDDDGASYASVSKLLCHPAYIKVLQNFKQVILDDEEDLFKRVHGMSMFEYMETDPTFKPLFHRAMSDISTMHMRQILETYKGFEGISTLVDVAGGIGQSLKMIVSKYPSIKGINYDLPQVVQHALSHAGITHVGGDMFRGVPEGDAIIIKAITHNWSDEKCIQILKNCHQSLKKDGKVILIDVIMPEIPKATNCDKYVSILDNIMFVQAGGKERTEKEFEALCKGAGFSRYQVACRVFSALGVIEFFK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1194 357 Gene3D - 1 108 IPR036388 -
Glsi01g1194 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 346 IPR029063 -
Glsi01g1194 357 Pfam Dimerisation domain 29 78 IPR012967 GO:0046983
Glsi01g1194 357 SUPERFAMILY "Winged helix" DNA-binding domain 9 111 IPR036390 -
Glsi01g1194 357 Gene3D Vaccinia Virus protein VP39 109 357 IPR029063 -
Glsi01g1194 357 FunFam Caffeic acid 3-O-methyltransferase 2 108 - -
Glsi01g1194 357 Pfam O-methyltransferase domain 136 338 IPR001077 GO:0008171
Glsi01g1194 357 CDD AdoMet_MTases 197 294 - -
Glsi01g1194 357 PIRSF O-mtase 2 357 IPR016461 GO:0008168
Glsi01g1194 357 PANTHER O-METHYLTRANSFERASE 17 339 IPR016461 GO:0008168
Glsi01g1194 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 18 357 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1194 Glsi-ChrGlsi01 63495196 63497139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1194 1 357 Monolignol Biosynthesis Gene Families AT5G54160 51.111 1.70e-116 340