Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1181 ATGCCTGCACCCTCCCCAACAGCACCGTTTGGTGGTACAGAAACTTCCAATGGAGATCCATCCATTTTTTCAGCTGCTTCCAAACGCTGCCCTCGAGAATCGCGTGACCTCCCTGCTTTATTGTCTTCCTCTTTCCCTATCACTCTAAAGTTTGTGGACGTGGGTTTCCGAGTAAAGATAGAGAAAAAGCATGGAGGGAGTTGCATCAAGCGAATGTTTAACTCTCAAGGCTCGTCACCGTCGGATCAGGGATCAACGGCAGCGACGCTGCAAGAGCGAACCGTTTTGAACGGTATTACAGGGATGGTGTCGCCAGGAGAGATCTTGGCCATATTGGGCCCATCAGGGAGCGGAAAATCAACGCTTTTAAACGCGATTGCAGGGAGACTCCAAGGACACGGCCTCACCGGAACAATCCTCACCAACGGAGCGAAACTCAGTAAAACTGTTCTCCGGCGAACTGGGTTCGTGACCCAGGACGACGTTCTCTACCCTCACCTCACAGTGCGTGAGACCTTGATCTTCTGCTCTCTACTTCGCCTCCCCAGAAGCCTCTCAAGAAAGGAGAAGATTTCGGTAGCAGAATCGGTAATTTCCGAGCTCGGTCTGGGGAAATGCGAGAACACCATAATTGGAAACAGCTTCATGCGTGGGGTTTCGGGAGGGGAAAGGAAGCGGGTCAGTATCGCCCACGAGATGCTGGTAAATCCGAGCTTGTTGATACTTGACGAGCCCACTTCTGGGTTGGACTCCACGGCTGCGCATCGGCTGGTGACCACTCTTGGGTCGTTGGCACAAAAGGGGAAGACGGTGGTGACGTCCATGCATCAGCCGTCGAGCCGTGTCTACCAGATGTTTGATGCGGTGCTCGTTCTGTCGGAAGGGCAGTGCTTGTATTTCGGGAAAGGAAGTGAAGCCATGAGCTACTTTGAGTCGGTTGGGTTCACGCCGTCTTTCCCAGTGAACCCTGCTGATTTTCTGCTTGATCTCGCCAACGGTGTTTGCCAAATTGAAGGTCTAAGTGAAAGAGATAGGCCGAACATAAAGCAGAACCTAATTCATTCCTACAACACAATACTAGCTCCCAAGGTAAAAGCTGCCTGCATGGACACTCCCAGTGCTGCTACCAAAAATACCCAACACTTCAGAACCAGCTCTTCCGGGGAACACTGTAGATTCAGTGACAGAGTTAGCTTCTCCAATTGGTTCAACCAATTCAGAATTCTGCTTCAACGAAGTCTCAAAGAAAGAAAGCACGAATCCTTCAACACTCTCAGAGTCTTCCAAGTTCTTGCTGCTGCACTATTAGCGGGTTTAATGTGGTGGCACTCTGACTACAGGAACATCCAAGACAGGCTTGGCTTTCTTTTCTTCATCTCCATCTTCTGGGGTGTTTTCCCGTCCTTCAATTCGGTCTTCGCTTTCCCTCAAGAACGAGCCATCTTCATGAAAGAGCGAGCTTCTGGTATGTACACACTGTCTTCCTATTTCATGGCTCGAATTGTGGGGGACTTGCCCATGGAGCTTCTTCTTCCCACGGTTTTCCTCATTGTGACTTACTGGATGGGTGGGTTAAAGCCTGACATCGGTGCTTTTCTATTGACTTTGTTGGTAGTCCTGGGTTATGTGCTTGTATCTCAGGGTCTTGGACTGGCTTTAGGTGCAGCAATAATGGATGCCAAACAGGCTTCCACAGTAGCAGCAGTGACAATGCTAGCATTTGTGTTAACTGGTGGATACTATGTGCATAAAGTGCCATCTTGTATGGCATGGACTAAGTATGTATCCACAACCTTTTACTGTTATAGGCTGCTGATAAATACCCAGTATGGGGATGGCAAGAAAATCTCAGATCTTCTTGGTTGCTCTCATGGTGGTGGAAATGATCATAGTGGAAACTGCAAGTTCGTTGAGGAAGATTTGTTGGGGCAAATCAGCCCAGAAGGAAGCATTGGTGTGTTGTTTCTCATGTTTGTGGGTTACAGATTATTGGCTTACCTTGCATTGAGGCGCATCAACGGTTGA 2025 0.4899 MPAPSPTAPFGGTETSNGDPSIFSAASKRCPRESRDLPALLSSSFPITLKFVDVGFRVKIEKKHGGSCIKRMFNSQGSSPSDQGSTAATLQERTVLNGITGMVSPGEILAILGPSGSGKSTLLNAIAGRLQGHGLTGTILTNGAKLSKTVLRRTGFVTQDDVLYPHLTVRETLIFCSLLRLPRSLSRKEKISVAESVISELGLGKCENTIIGNSFMRGVSGGERKRVSIAHEMLVNPSLLILDEPTSGLDSTAAHRLVTTLGSLAQKGKTVVTSMHQPSSRVYQMFDAVLVLSEGQCLYFGKGSEAMSYFESVGFTPSFPVNPADFLLDLANGVCQIEGLSERDRPNIKQNLIHSYNTILAPKVKAACMDTPSAATKNTQHFRTSSSGEHCRFSDRVSFSNWFNQFRILLQRSLKERKHESFNTLRVFQVLAAALLAGLMWWHSDYRNIQDRLGFLFFISIFWGVFPSFNSVFAFPQERAIFMKERASGMYTLSSYFMARIVGDLPMELLLPTVFLIVTYWMGGLKPDIGAFLLTLLVVLGYVLVSQGLGLALGAAIMDAKQASTVAAVTMLAFVLTGGYYVHKVPSCMAWTKYVSTTFYCYRLLINTQYGDGKKISDLLGCSHGGGNDHSGNCKFVEEDLLGQISPEGSIGVLFLMFVGYRLLAYLALRRING 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1181 674 FunFam ABC transporter G family member 22 83 313 - -
Glsi01g1181 674 Pfam ABC-2 type transporter 405 610 IPR013525 GO:0016020|GO:0140359
Glsi01g1181 674 SMART AAA_5 105 296 IPR003593 GO:0016887
Glsi01g1181 674 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 49 319 IPR003439 GO:0005524
Glsi01g1181 674 Pfam ABC-2 type transporter 276 373 IPR043926 GO:0140359
Glsi01g1181 674 MobiDBLite consensus disorder prediction 1 22 - -
Glsi01g1181 674 Gene3D - 85 313 IPR027417 -
Glsi01g1181 674 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 36 666 - -
Glsi01g1181 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 313 IPR027417 -
Glsi01g1181 674 Pfam ABC transporter 96 247 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1181 Glsi-ChrGlsi01 63090526 63098721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1181 95 312 Calmodulin-binding Proteins AT2G36910 29.730 1.03e-14 76.3