Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1169 ATGATGATGGCAAAGAAAGAAGTGGCTGAAGCAAGACATAAAGGGACTCCAAAAGGGCACTTTGTGGTCTACGTGGGCAGTGAAATGACAAGGTTTGTGGTGCCTATGACATGCCTGAAGAACCCCATCTTCCAGAGATTGCTAGAGAAAGCTGCAGATGAGTATGGCTTTGATAACCCAAATGGGATTGTTCTACCTTGTGATTCATATACCTTCAGGAGATTAACTACACTCATGGAGAAGTAG 246 0.439 MMMAKKEVAEARHKGTPKGHFVVYVGSEMTRFVVPMTCLKNPIFQRLLEKAADEYGFDNPNGIVLPCDSYTFRRLTTLMEK 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1169 81 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 10 75 IPR003676 GO:0009733
Glsi01g1169 81 Pfam Auxin responsive protein 10 78 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1169 Glsi-ChrGlsi01 62635065 62635310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1169 17 80 Calmodulin-binding Proteins AT3G43120 45.312 5.09e-17 68.9