Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1152 ATGGCCAAAGCGGTGCTCCTAACCCACGATCAATTTTTGTCAAATCGAACTATTCCTGACTCAATGACAGCTCTTGGCAGCCATGAATATAGTTTGCCCTTCATATCCGTTTCGCCTCTTTGGCGAAGCCTAAGGAAAATATGCAATGTTCATTTATTCGCCCACAATGTTCTTGACACCAGCCAAGACCTTAGGCGTAACAAACTGCAACAACTCCTCCTTGATATCCATCAAAGCAGTCTAACTGGTGAAGCTGTAGATATCGGGAAAGCATCTTTTAAAACTACCATCAATTTGTTGTCAAATACTATTTTCTCTGTGGAATTTGTTCACTCTGTAGGTGCAGTAGGGCAGTTCAAGGAGACAGTGGTCCAGAGCATGAAAGAAGTTGGACGACCCAACCCAGCCGATTATTTTCCTGCGCTGAAGATGATTGACCCACTGGGCATCAGAAGGCGCACCGCTATTCACTTTCAAAAATTATTAGATGTCTTCCATAGCTTGATTAACCAACGGTTGAAGCAGAGAAGAACCACAGGTTGTGCCAACAACGACATCTTAGATGCCCTGCTCAACATTTCTGAAGAGAACAGTCAAGACATGGACACAACATGGATTGAACATTTATCAGCGGACCTCTTTTTGGCCGGGACTGATACAACTACATCAACGCTAGAATGGGCAATGGCAGAGCTACTCCACAACCCGCAGGTAATGTCGAAAGCAAAAGCAGAGCTGGAGCAAACCATCGGCAAAGGTAACCCTGTTGAAGAATCAGATATGGCTAGGCTCCCTTACTTGCAAGCAATACTAAAAGAGACTTTCCGATTGCACCCAGCAGTTCCATTTTTACTACCTCGGAAAGCCGAGATAGATGTGGAACTGGGCGGCTACACAGTCCCAAAGGGTGCACAAGTGCTGGTTAATGTTTGGGCTATCGGCAGGGATCCTGGCATATGGGAAAATCCAGATTCGTTTTGCCCAGAGAGGTTCTTGGGGTCACAAATTGATGTCAAAGGCAGGAACTTTGAGCTGACTCCGTTTGGTGCTGGGCGACGAATATGTCCTGGCTTGCCGTTGGCAATGAGGATGTTGTTTCTGATGCTGGGTTCGCTCATCAACTCCTTTGACTGGAAGCTAGAAGGTGAAATGAAACCAGAGGATATAGACATGGAAGATAAATTTGGAATTACCTTAGAGAAGGCTCAACCTGTGCTTGCCGTTCCATTTAGAGCAAGCAATGAATGA 1248 0.4559 MAKAVLLTHDQFLSNRTIPDSMTALGSHEYSLPFISVSPLWRSLRKICNVHLFAHNVLDTSQDLRRNKLQQLLLDIHQSSLTGEAVDIGKASFKTTINLLSNTIFSVEFVHSVGAVGQFKETVVQSMKEVGRPNPADYFPALKMIDPLGIRRRTAIHFQKLLDVFHSLINQRLKQRRTTGCANNDILDALLNISEENSQDMDTTWIEHLSADLFLAGTDTTTSTLEWAMAELLHNPQVMSKAKAELEQTIGKGNPVEESDMARLPYLQAILKETFRLHPAVPFLLPRKAEIDVELGGYTVPKGAQVLVNVWAIGRDPGIWENPDSFCPERFLGSQIDVKGRNFELTPFGAGRRICPGLPLAMRMLFLMLGSLINSFDWKLEGEMKPEDIDMEDKFGITLEKAQPVLAVPFRASNE 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1152 415 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1152 415 PRINTS P450 superfamily signature 346 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1152 415 PRINTS P450 superfamily signature 269 280 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1152 415 PRINTS P450 superfamily signature 216 233 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1152 415 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 410 - -
Glsi01g1152 415 PRINTS E-class P450 group I signature 205 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1152 415 PRINTS E-class P450 group I signature 345 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1152 415 PRINTS E-class P450 group I signature 95 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1152 415 PRINTS E-class P450 group I signature 355 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1152 415 PRINTS E-class P450 group I signature 1 16 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1152 415 PRINTS E-class P450 group I signature 225 251 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1152 415 PRINTS E-class P450 group I signature 268 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1152 415 PRINTS E-class P450 group I signature 309 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1152 415 FunFam Geraniol 8-hydroxylase 158 408 - -
Glsi01g1152 415 Pfam Cytochrome P450 1 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1152 415 Gene3D Cytochrome P450 1 408 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1152 415 SUPERFAMILY Cytochrome P450 1 408 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1152 415 CDD CYP76-like 1 409 - -
Glsi01g1152 415 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 348 357 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1152 Glsi-ChrGlsi01 62210961 62212297 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1152 2 411 Cytochrome P450 AT2G45550 47.596 1.35e-138 404