Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1150 ATGGATCTTATTAGTTGTATACTGCTTCTTTTGTTCAGCTATACCTTTATTCAAGCTCTACGGTCATTGCTTGGAAGATGCAGCAGCTCAGCAAAGTACAATCTTCCACCGGGGCCTGCCCCTCTTCCCATAATTGGAAACCTCCTTGAACTGGGTAAAAAACCCCACCAGTCTTTGGCCAAGCTTGCGGAGAATTACGGTCCAATCATGAGTTTAAAGTTAGGCCAAGTCACCACCATAGTCATCACTTCGGCGGACATGGCCAAAGGGGTGCTCCTAACCCATGATCAATTTTTGTCAAATCGAACTATTCCTGACGCAATGACCGCTCTTGGCCGCCATGAATATAGCTTGCCCTTCATATCCGTTTCGCCTCTTTGGCGAAGCCTAAGGAAAATATGCAATGTTCATTTATTCGCCAACAATGTTCTTGACACCAGCCAAGACCTTAGGCGTAACAAAGTGCAACAACTCCTCCTTGATATCCATCAAAGCAGTCTAACTGGTGAAGCTGTAGATATCGGGAAAGCAGCTTTTAAAACTACCATTAATTTGTTGTCAAATACTATTTTTTCTGTGGATTTGGTTCACTCTGTAGGTGCAGTAGGGGAGTTCAAGGAGATAGTGGTCCATATCATGAAAGAGGTTGGAAAACCCAACCTGGCCGATTATTTTCCTGCACTGAAGGTGATCGACCCACTGGGCATCAGAAGGCGCACCGCTATTCACTTTCGCAAACTATTAGATGTCTTCGATAGCTTGGTTAGCCAACGGTTGAAGCAGAGGAGAACCACAGGTTGTGCCAACAACGACATCTTAGATGCCCTGCTCAACATTTCTCAAGAAAACAGTCAAGAGATGAACACAGCACAGATTGAACATTTATCAGTGGACCTCTTTGTCGCCGGGACTGATACAACTACATCAACACTAGAATGGGCAATGGCAGAGCTACTCCACAACCCGAAGGTAATGTCTAAAGCAAAAGAAGAGCTGGAGCAAACCATCGGCAAAGGTAACCCAGTTGAAGAATCAGATATTGCTAGGCTCCCTTACCTGCAAGCAATACTAAAAGAGACTTTCCGATTGCACCCAGCAGTTCCATTTTTACTACCTCGCAAAGCCGAGATAGATGTGGAACTGGGCGGCTACACAGTCCCCAGCGGTGCACAAGTGCTGCTTAATGTTTGGGCTATCGGCAGGGATCCCAGCATATGGGAAGATCCAGATTCGTTTTCACCAGAGAGGTTCTTGGGGTCACAAATTGATGTCAAAGGCAGGAACTTTGAGCTGACTCCGTTTGGTGCTGGGCGACGAATATGTCCTGGCTTGCCGTTGGCAATGAGGATGTTGTTTCTGATGTTGGGTTCGATCATCAACTCCTTTGATTGGAAGCTAGAAGGTGGAATGAAACCAGAGGATATGGACATGGAAGATAAATTTGGAATTACCTTAGAGAAGGCTCAACCTGTGCTTGCCGTTCCATTTAGAGCAAGCAATGAATGTTGCTAA 1512 0.457 MDLISCILLLLFSYTFIQALRSLLGRCSSSAKYNLPPGPAPLPIIGNLLELGKKPHQSLAKLAENYGPIMSLKLGQVTTIVITSADMAKGVLLTHDQFLSNRTIPDAMTALGRHEYSLPFISVSPLWRSLRKICNVHLFANNVLDTSQDLRRNKVQQLLLDIHQSSLTGEAVDIGKAAFKTTINLLSNTIFSVDLVHSVGAVGEFKEIVVHIMKEVGKPNLADYFPALKVIDPLGIRRRTAIHFRKLLDVFDSLVSQRLKQRRTTGCANNDILDALLNISQENSQEMNTAQIEHLSVDLFVAGTDTTTSTLEWAMAELLHNPKVMSKAKEELEQTIGKGNPVEESDIARLPYLQAILKETFRLHPAVPFLLPRKAEIDVELGGYTVPSGAQVLLNVWAIGRDPSIWEDPDSFSPERFLGSQIDVKGRNFELTPFGAGRRICPGLPLAMRMLFLMLGSIINSFDWKLEGGMKPEDMDMEDKFGITLEKAQPVLAVPFRASNECC 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1150 503 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 12 496 - -
Glsi01g1150 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Glsi01g1150 503 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1150 503 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1150 503 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1150 503 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1150 503 Gene3D Cytochrome P450 24 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1150 503 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1150 503 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1150 503 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1150 503 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1150 503 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1150 503 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1150 503 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1150 503 SUPERFAMILY Cytochrome P450 36 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g1150 503 CDD CYP76-like 63 495 - -
Glsi01g1150 503 FunFam Cytochrome P450 76C4 27 494 - -
Glsi01g1150 503 Pfam Cytochrome P450 36 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1150 Glsi-ChrGlsi01 62186322 62187924 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1150 1 497 Cytochrome P450 AT2G45550 48.024 3.21e-166 478