Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1136 ATGGAATACGAAGTGAAAACCACAGCATCTCCTCCACCAATCGCAATCCCTGTTCCCACTATTCTCTCCAATTCTCCTCACACTTCCTCTTCTTCCCCCTCTGTTTCTCCACCTCCCCCGTCTCCTCCTCCGCCTGCGGTGGTGGCCAGCCCTTGCGCCGCCTGCAAGATCCTCCGACGCCGGTGCGTTGAGAAGTGTGTCTTGGCTCCCTATTTCCCTCCCACTGATCCACTCAAGTTTACCATTGCCCACAGAGTCTTTGGAGCGAGCAACATCATCAAGTTCTTGCAGGAAGTACCAGAGAGTCAGAGAGCAGATGCTGTGAGCAGCATGGTTTATGAAGCAAATGCCAGGATCAGAGACCCAGTGTACGGGTGTGCAGGGGCAATATGCCAACTTCAGAAGCAAGTTAGCGAGCTGCAAACGCAACTGGCCAAAGCACAAGCTGATCTTGTCACCATGCAGTGCCAGCAAGCCAATTTGGTTGCCCTAATATGCATGGAAATGAGCCAATCTCAGGAGCAGCAGCAGCAGCAGAACATTATGCTTCAGCAGCCTCAACCACATAATGTTGATATGAGCTGCTTCCTGGATGAACACAGCGTGGAATCTGCTTGGGAGCCTCTTTGGGCATGA 636 0.5236 MEYEVKTTASPPPIAIPVPTILSNSPHTSSSSPSVSPPPPSPPPPAVVASPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQEVPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQTQLAKAQADLVTMQCQQANLVALICMEMSQSQEQQQQQNIMLQQPQPHNVDMSCFLDEHSVESAWEPLWA 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1136 211 Pfam Lateral organ boundaries (LOB) domain 51 148 IPR004883 -
Glsi01g1136 211 Coils Coil 137 157 - -
Glsi01g1136 211 ProSiteProfiles LOB domain profile. 50 151 IPR004883 -
Glsi01g1136 211 MobiDBLite consensus disorder prediction 1 43 - -
Glsi01g1136 211 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 50 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1136 Glsi-ChrGlsi01 61915690 61917155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1136 47 210 AS2 family AT1G07900 66.467 1.90e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi01g1136 LOB 2.8e-41 No_clan