Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1130 ATGTTTATTTTGTTTGCTGTTGCTATTATCCGTCGTTCGAATCAGGCATCACAATCAGTAGGGGCCCAGTTCTCCTACCCCTCAATCCCTTCCGTAATTGTTCCATTCCTCGTAGCTCAAGTTTTCTTTGCCAAGATCTGGTCCCTCCCCCTCTCTTTTGTCTTCACAGGCCACGCGTGGTCACCAACTTGTTGGGGGTATTTTTTGGTTTCGCTGGGGGAGAGCAAGGTGCCTAGCTTGGCAGAGATCTGGGATTTCATGCGAAGGCATGGAATTTCGTTTTCTTTAACATTTCGCTTGGGATTTAACGTGTATTATCTGAAATATGAGATATATTACTCGGACATGGCGAGGAAAGGAGGTTGGTTTTCTGCAGTGAAGAAAGTTCTCAGTCCCGATTCCAGGAAAGATCAGAAAAACCATAAGTTGAAGACAAAATGGTTTGGCAAACACACGGATTTGGAACCAGTTTTTCCGTCCAAAGAAGCTCCATTTGCTGTTGCTACCCCTCTTCCACCTTTAGAAGATATTAAATTAATTGAGGCAGAGAATGAAAAGAGCAAGCATGCTTATTCTGTGGCTCTTGCCACTGCTGTTGCAGCAGAGGCTGCTGTTGCTGCTGCTCAAGCTGCTGCAGAGGTTGTTCGTCTTACAAGTGTGCCCCGTTACCCTGGAAAGACAAAGGAAGAAATAGCAGCTATCAAGATTCAGGCGGCATATCGAGGGTATTTGGCAAGAAGGGCATTGCATGCATTGAGAGGTTTGGTGAGGTTGAAAACATTGATACAAGGGCATACGGTTAAACGGCAAGCAGCAACCACCTTACGATGCATGCAGACTCTTGCACGGGTGCAGTCTCAGATTCGTGACAGGAGGATTAGAATGTCTGAGGAGAATCAGGCTCTTCAGCTGCAGCTGCAGCAGAAACATGAAAGGGAACTCAATAAACTGCAAGCTGCTATTGGAGAAGAATGGGACGATAGCTTAAAATCGAAGGAACAAATCGAAGCAAGGCTGTTGAACAGGCAAGAAGCCGCTATGAGAAGAGAGAGAGCTATGGCTTATGCATTCTCACATCAGCAAACATGGAAGAACTCTTCAAAATCTGTAAATTCTATGTTTATGGATAACAATCCCCACTGGGGTTGGAGTTGGATGGAACGATGGATGGCATCCCGGCCATGGGAGAGCCGAAGCACTATGGATTACAATGACCGTGCATCTGTAAAGAGTGCAGCAAGCCATGCTATGTCAGTTGGGGATATCACCAAATTGTATTCTCTTCGTGATCTTAATCATTATAGTAAGCCTTCCCTTGCCGGCCAAAAATCAAGCCGACCTTCCAGTCAACATTCCCCAATAACCCCAGCTTCAAAGGCCCCACCTTTGTCATCTGCTACTGGAAAAGAAAGGCCACCAAGCCCAAAGGGAAATGCCTTCGGTGGTGGTGACGATGACTCAAGGAGCATGTTTAGCATTCAGTCAGAACGCTTTCGTAGGCATAGCATTGGAGGATCATCAGTAAGAGACGATGAGAGCCTTGCGAGCTCACCTGCCTTTCCGAGTTACATGGTACCCACAAAGTCAGCCAAGGCCAAGTCCAGAATGCAAAGTCCATCTGGTGTAGATAAACATGGGACACCTGAAAAGGGATCTGTTACTTCTGCAAAGAAGCGGCTTTCCTTCCCATCTTCTCCAGCTAGTTCAAAGAGGCATTCTGATCCTCCCAAGGTAGGCATTTTTGCCAAAAAGGATGTTGCTACAGCCTTTGCAGAGAAAATACGCTATGGAGGGAGTAGTTAG 1803 0.4637 MFILFAVAIIRRSNQASQSVGAQFSYPSIPSVIVPFLVAQVFFAKIWSLPLSFVFTGHAWSPTCWGYFLVSLGESKVPSLAEIWDFMRRHGISFSLTFRLGFNVYYLKYEIYYSDMARKGGWFSAVKKVLSPDSRKDQKNHKLKTKWFGKHTDLEPVFPSKEAPFAVATPLPPLEDIKLIEAENEKSKHAYSVALATAVAAEAAVAAAQAAAEVVRLTSVPRYPGKTKEEIAAIKIQAAYRGYLARRALHALRGLVRLKTLIQGHTVKRQAATTLRCMQTLARVQSQIRDRRIRMSEENQALQLQLQQKHERELNKLQAAIGEEWDDSLKSKEQIEARLLNRQEAAMRRERAMAYAFSHQQTWKNSSKSVNSMFMDNNPHWGWSWMERWMASRPWESRSTMDYNDRASVKSAASHAMSVGDITKLYSLRDLNHYSKPSLAGQKSSRPSSQHSPITPASKAPPLSSATGKERPPSPKGNAFGGGDDDSRSMFSIQSERFRRHSIGGSSVRDDESLASSPAFPSYMVPTKSAKAKSRMQSPSGVDKHGTPEKGSVTSAKKRLSFPSSPASSKRHSDPPKVGIFAKKDVATAFAEKIRYGGSS 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1130 600 Coils Coil 292 312 - -
Glsi01g1130 600 Gene3D iswi atpase 226 264 - -
Glsi01g1130 600 MobiDBLite consensus disorder prediction 437 462 - -
Glsi01g1130 600 ProSiteProfiles IQ motif profile. 229 257 IPR000048 GO:0005515
Glsi01g1130 600 SMART iq_5 228 250 IPR000048 GO:0005515
Glsi01g1130 600 MobiDBLite consensus disorder prediction 436 579 - -
Glsi01g1130 600 MobiDBLite consensus disorder prediction 557 571 - -
Glsi01g1130 600 PANTHER IQ-DOMAIN 5-RELATED 116 568 - -
Glsi01g1130 600 Pfam IQ calmodulin-binding motif 232 249 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1130 Glsi-ChrGlsi01 61644147 61651158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1130 116 578 IQD Protein Family AT5G03040 47.899 1.62e-125 376