Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1123 ATGGGTTATTCCCAACTCTATTTCCTTTTGCTTTTATCCATTTTGTCGGGAATTTGTTTGACTTCCGCTATAGGAGATCAAAAGCGTGATAGAATTACCGAGTTGCCAGGACAACCAAAGAATGTGGAATTTGCTCAGTACTCGGGATATGTGACAGTGAATAAGGAGGCCGGGAGGGCATTGTTTTACTGGTTGACTGAGGCACCAGCGAGCCGTGGACCTTGGTCAAGGCCTCTAGTATTATGGCTTAATGGTGGTCCTGGATGCTCCTCTATTGCTTATGGGGCATCTGAAGAGATTGGCCCTTTTCGCATTAGGCCTGATGGGAAGTCACTGTACTTGAATCCTTATGCTTGGAACAAGTTGGCAAATATACTATTCCTTGATTCTCCCGCTGGCGTTGGCTTTTCATATTCGAATAAAACATCAGATCTGTATACTATGGGTGACCGTAGAACAGCCGAAGATGCATATACATTTCTTGTTAATTGGTTTGAAAGATTTCCTCAGTATAAACACAGAGAATTCTACATTGCTGGAGAAAGTTATGCAGGTCACTATGTTCCTCAGTTGGCTCAGATAGTTTACCAGAAAAACAAGGGAATCAAGAATCCAGTCATAAATTTTAAGGGATTTATGGTTGGAAATGCTGTAACTGATGATTACCATGATTATGTTGGTACATTTGAGTACTGGTGGACCCATGGTTTAATTTCAGATTCAACATATAGGATGCTGCGAATTGCCTGTAACTCTGGGTCCTCCCAGCATCCTACATTACGATGCATGCAGGCTCTCAGAGTTGCAGTTGTTGAGCAGGGGAACATTGATCCGTATAGCATTTATACACGGCCATGCAATAATACAGCATCACTGAAACGCAGCTTGAGGGGTCGCTATCCATGGATGTCTCGAGCATATGATCCGTGTACTGAGAGGTATGCTAACTTGTACTTCAATCATCCTGAAGTTCAGAAGGCACTACATGCCAATATAACTGGGATTTCCTATCCATGGAAGACCTGCAGTGATATTGTTGGGAACTATTGGGCGGATTCTCCACTATCTATGCTCCCTATATATCAAGAACTCATTAATGCTGGTTTCAAGATATGGGTATACAGTGGAGACACAGATGCCGTGGTTCCAGTAACCGCAACCCGATATTCTATTGATGCCTTGAAGCTACCTACCATCATCAACTGGTGCCCCTGGATTGATAACGGCAAGGTTGGTGGCTGGAGTCAAGTTTACAAAGGCCTCACATTCGTTACAGTTACAGGAGCAGGACATGAGGTTCCTCTTCATAGGCCTCGCCAAGCATTTATTCTTTTCAGGTCATTCTTGAAGAACAAGTCCATGCCAAGTTGA 1371 0.4347 MGYSQLYFLLLLSILSGICLTSAIGDQKRDRITELPGQPKNVEFAQYSGYVTVNKEAGRALFYWLTEAPASRGPWSRPLVLWLNGGPGCSSIAYGASEEIGPFRIRPDGKSLYLNPYAWNKLANILFLDSPAGVGFSYSNKTSDLYTMGDRRTAEDAYTFLVNWFERFPQYKHREFYIAGESYAGHYVPQLAQIVYQKNKGIKNPVINFKGFMVGNAVTDDYHDYVGTFEYWWTHGLISDSTYRMLRIACNSGSSQHPTLRCMQALRVAVVEQGNIDPYSIYTRPCNNTASLKRSLRGRYPWMSRAYDPCTERYANLYFNHPEVQKALHANITGISYPWKTCSDIVGNYWADSPLSMLPIYQELINAGFKIWVYSGDTDAVVPVTATRYSIDALKLPTIINWCPWIDNGKVGGWSQVYKGLTFVTVTGAGHEVPLHRPRQAFILFRSFLKNKSMPS 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1123 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 421 434 IPR001563 GO:0004185|GO:0006508
Glsi01g1123 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Glsi01g1123 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Glsi01g1123 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Glsi01g1123 456 ProSitePatterns Serine carboxypeptidases, histidine active site. 421 438 IPR033124 GO:0004185
Glsi01g1123 456 SUPERFAMILY alpha/beta-Hydrolases 27 454 IPR029058 -
Glsi01g1123 456 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Glsi01g1123 456 Gene3D alpha/beta hydrolase 26 288 IPR029058 -
Glsi01g1123 456 Pfam Serine carboxypeptidase 36 451 IPR001563 GO:0004185|GO:0006508
Glsi01g1123 456 Gene3D - 310 346 - -
Glsi01g1123 456 FunFam Carboxypeptidase 357 451 - -
Glsi01g1123 456 FunFam Carboxypeptidase 307 454 - -
Glsi01g1123 456 Gene3D - 357 450 - -
Glsi01g1123 456 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 438 IPR001563 GO:0004185|GO:0006508
Glsi01g1123 456 FunFam Carboxypeptidase 26 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1123 Glsi-ChrGlsi01 61525807 61530866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1123 315 454 Calmodulin-binding Proteins AT2G22960 29.078 5.79e-15 71.2